RNA–Protein interactions for RNA: ENST00000517083.1

RNU6-548P-201, Transcript of RNA, U6 small nuclear 548, pseudogene, humanhuman

BASIC

Gene RNU6-548P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-548P-201ENST00000517083 DDX41Q9UJV9 622 aaKnown RBP2.39□□□□□ -2.03
RNU6-548P-201ENST00000517083 GNEQ9Y223 722 aaKnown RBP2.39□□□□□ -2.03
RNU6-548P-201ENST00000517083 ENTPD4Q9Y227 616 aa2.39□□□□□ -2.03
RNU6-548P-201ENST00000517083 NUDCQ9Y266 331 aa2.39□□□□□ -2.03
RNU6-548P-201ENST00000517083 CTDP1Q9Y5B0 961 aaPredicted RBP2.39□□□□□ -2.03
RNU6-548P-201ENST00000517083 MYH3P11055 1940 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 ACANP16112 2415 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 N4BP3O15049 544 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 MTSS1O43312 755 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 FLOT1O75955 427 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 DKK1O94907 266 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 C4BPAP04003 597 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CFIP05156 583 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 ATXN1LP0C7T5 689 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 LAMP2P13473 410 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 EPCAMP16422 314 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 GBP1P32455 592 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 NOP2P46087 812 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 SLC4A3P48751 1232 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PTH1RQ03431 593 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PTPN11Q06124 597 aaPredicted RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 BMS1Q14692 1282 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 RTP5Q14D33 572 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 RAB3GAP1Q15042 981 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CCDC57Q2TAC2 916 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 HDGFL1Q5TGJ6 251 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CAPRIN2Q6IMN6 1127 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 GDF6Q6KF10 455 aaPredicted RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 ATF7IPQ6VMQ6 1270 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 LDHAL6AQ6ZMR3 332 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 Q6ZS52 159 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 GET4Q7L5D6 327 aaPredicted RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 RASGRP2Q7LDG7 609 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 GDF7Q7Z4P5 450 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 DZIP1Q86YF9 867 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 FAM114A1Q8IWE2 563 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CMTR2Q8IYT2 770 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 MINDY1Q8N5J2 469 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 DNERQ8NFT8 737 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 KCNE4Q8WWG9 221 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 EXTL1Q92935 676 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PHACTR3Q96KR7 559 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 C12orf42Q96LP6 360 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 SLITRK1Q96PX8 696 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 NOL10Q9BSC4 688 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 TMEM245Q9H330 911 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 NGRNQ9NPE2 291 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CASS4Q9NQ75 786 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 TOR4AQ9NXH8 423 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PI4KBQ9UBF8 816 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PUF60Q9UHX1 559 aaKnown RBP2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 ZBTB21Q9ULJ3 1066 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 KNSTRNQ9Y448 316 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 PCDHB12Q9Y5F1 795 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 VWFP04275 2813 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 MIA3Q5JRA6 1907 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 KIAA1217Q5T5P2 1943 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 CLUHO75153 1309 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 TET1Q8NFU7 2136 aa2.38□□□□□ -2.03
RNU6-548P-201ENST00000517083 EPPK1P58107 5090 aaKnown RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 MICAL3Q7RTP6 2002 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 ARHGEF17Q96PE2 2063 aaPredicted RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 CCDC163A0A0D9SF12 145 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 FAM221AA4D161 298 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 C2orf71A6NGG8 1288 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 RSPH10B2B2RC85 870 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 C3orf80F5H4A9 247 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 MAN2B1O00754 1011 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 EXTL3O43909 919 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 KPNA6O60684 536 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 CBFA2T3O75081 653 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 VPS4BO75351 444 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 DGKIO75912 1065 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 HLA-DOAP06340 250 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 KRT7P08729 469 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 RSPH10BP0C881 870 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 CHRNB1P11230 501 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 JUPP14923 745 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 KLK2P20151 261 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 IBSPP21815 317 aaPredicted RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 PCSK6P29122 969 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 HDAC4P56524 1084 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 PPP2R2AP63151 447 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 GFPT1Q06210 699 aaPredicted RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 SLC14A1Q13336 389 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 KARSQ15046 597 aaKnown RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 PARM1Q6UWI2 310 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 DHRS13Q6UX07 377 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 C15orf39Q6ZRI6 1047 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 ARMCX2Q7L311 632 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 UBE3BQ7Z3V4 1068 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 TMC7Q7Z402 723 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 ZNF467Q7Z7K2 595 aaPredicted RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 TMPRSS12Q86WS5 348 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 DHX40Q8IX18 779 aaKnown RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 ANKRD35Q8N283 1001 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 MAGEB6Q8N7X4 407 aa2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 ARL14EPQ8N8R7 260 aaPredicted RBP2.37□□□□□ -2.03
RNU6-548P-201ENST00000517083 MRPL43Q8N983 215 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms