RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RFC2P35250 354 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 MATR3P43243 847 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 CLCN3P51790 818 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 NLRP11P59045 1033 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 MRPS6P82932 125 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 MLLT1Q03111 559 aaPredicted RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 TMEM62Q0P6H9 643 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 STRN3Q13033 797 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 PPIGQ13427 754 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 TARBP2Q15633 366 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 ECM1Q16610 540 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 SKOR2Q2VWA4 1001 aaPredicted RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 HERC4Q5GLZ8 1057 aaPredicted RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 L1TD1Q5T7N2 865 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 RINT1Q6NUQ1 792 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 KRBA2Q6ZNG9 492 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 CLEC17AQ6ZS10 378 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 LRRC8DQ7L1W4 858 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 DYMQ7RTS9 669 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 ZNF410Q86VK4 478 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 FAM126BQ8IXS8 530 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 TMEM87AQ8NBN3 555 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 PRPF31Q8WWY3 499 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 BICD1Q96G01 975 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 PPP1R16BQ96T49 567 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 CELF4Q9BZC1 486 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 GTPBP4Q9BZE4 634 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 MTIF3Q9H2K0 278 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 DHX33Q9H6R0 707 aaKnown RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 C17orf75Q9HAS0 396 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 PARVGQ9HBI0 331 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 KMT5AQ9NQR1 393 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 EXOC1Q9NV70 894 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 PANK4Q9NVE7 773 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 RNF216Q9NWF9 866 aaPredicted RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 WRAP73Q9P2S5 460 aaPredicted RBP6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 ODF2LQ9ULJ1 636 aa6.03□□□□□ -1.44
SCARNA16.4-201ENST00000516956 GRIN2DO15399 1336 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MYH15Q9Y2K3 1946 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PCNTO95613 3336 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MBLAC1A4D2B0 266 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 INO80B-WBP1J3KQ70 363 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 K7ERI5 159 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PITPNM1O00562 1244 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 GPR182O15218 404 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 GTPBP6O43824 516 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 GADD45BO75293 160 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 RPS6KA5O75582 802 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 TIMP1P01033 207 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CD4P01730 458 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 VTNP04004 478 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CKBP12277 381 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PLS3P13797 630 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 ZSCAN20P17040 1043 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SCP2P22307 547 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MCM4P33991 863 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 NAMPTP43490 491 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MNX1P50219 401 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 EFNA5P52803 228 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CRYBB1P53674 252 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SLC12A3P55017 1021 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CCL23P55773 120 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PEX3P56589 373 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 FPGSQ05932 587 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 FAAP100Q0VG06 881 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 LAMTOR4Q0VGL1 99 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 NFX1Q12986 1120 aaKnown RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PAK2Q13177 524 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 STIM1Q13586 685 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 HSP90AA2PQ14568 343 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SNX17Q15036 470 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 KIZQ2M2Z5 673 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 LONRF3Q496Y0 759 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MARCH8Q5T0T0 291 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 RUFY4Q6ZNE9 571 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 C1orf186Q6ZWK4 172 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CATSPER4Q7RTX7 472 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 KCNK18Q7Z418 384 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SRGAP1Q7Z6B7 1085 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 DEFB128Q7Z7B8 93 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 FAM178BQ8IXR5 827 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 HACE1Q8IYU2 909 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 KIAA0319LQ8IZA0 1049 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SYCP3Q8IZU3 236 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 USP38Q8NB14 1042 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 RNF149Q8NC42 400 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SEPT8Q92599 483 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 DDX12PQ92771 950 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 STAMQ92783 540 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SMARCE1Q969G3 411 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PAGE5Q96GU1 130 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 TIGD1Q96MW7 591 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 MRPL44Q9H9J2 332 aaKnown RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 DACT1Q9NYF0 836 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 SEL1LQ9UBV2 794 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 ZMYND8Q9ULU4 1186 aaPredicted RBP6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 EXOC7Q9UPT5 735 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 PCDHB13Q9Y5F0 798 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 CDY2AQ9Y6F7 541 aa6.02□□□□□ -1.45
SCARNA16.4-201ENST00000516956 DOCK5Q9H7D0 1870 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms