RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SLC43A3Q8NBI5 491 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SMG8Q8ND04 991 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF507Q8TCN5 953 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ACER1Q8TDN7 264 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 WFDC12Q8WWY7 111 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SREK1Q8WXA9 508 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 BRI3BPQ8WY22 251 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 BRF1Q92994 677 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SNX21Q969T3 373 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 LENG1Q96BZ8 264 aaPredicted RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 MTMR8Q96EF0 704 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SEC16BQ96JE7 1060 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 CLMNQ96JQ2 1002 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 CAPNS2Q96L46 248 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ZSCAN31Q96LW9 406 aaPredicted RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 FEZ1Q99689 392 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 TMEM47Q9BQJ4 181 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 LZTS2Q9BRK4 669 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 YIPF2Q9BWQ6 316 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SPZ1Q9BXG8 430 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 TMPRSS13Q9BYE2 586 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 UPF3BQ9BZI7 483 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ATXN3LQ9H3M9 355 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 KAT14Q9H8E8 782 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF408Q9H9D4 720 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 TOMM22Q9NS69 142 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 RBM28Q9NW13 759 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SAGE1Q9NXZ1 904 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 TMOD4Q9NZQ9 345 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 MORF4L1Q9UBU8 362 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 KLHL3Q9UH77 587 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ABT1Q9ULW3 272 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 PPT2Q9UMR5 302 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ADAMTS5Q9UNA0 930 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 HIF3AQ9Y2N7 669 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 CORINQ9Y5Q5 1042 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 SLC12A7Q9Y666 1083 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 ZHX2Q9Y6X8 837 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 POLR2AP24928 1970 aaKnown RBP2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 PTPRFP10586 1907 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 MYH8P13535 1937 aa2.54□□□□□ -2
SCARNA16.3-201ENST00000516595 CCL15-CCL14A0A0B4J2E2 113 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 LOC102724159A0A0B4J2E5 919 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 KLF18A0A0U1RQI7 1052 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FAM221AA4D161 298 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FAM86C2PA6NEL3 165 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CCDC69A6NI79 296 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TRIM75PA6NK02 468 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GOLGA8AA7E2F4 631 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GOLGA8BA8MQT2 603 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 BTBD19C9JJ37 291 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 IGF2BP3O00425 579 aaKnown RBP eCLIP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 VWA5AO00534 786 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TM4SF5O14894 197 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZBTB5O15062 677 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 FANCGO15287 622 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZBTB43O43298 467 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 DHX16O60231 1041 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 NMT2O60551 498 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TLR2O60603 784 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PFKFB2O60825 505 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CDKL5O76039 1030 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PARP1P09874 1014 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ADH5P11766 374 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 BMP3P12645 472 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SELPP16109 830 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 IFNAR1P17181 557 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GARTP22102 1010 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 LORP23490 312 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 COL8A1P27658 744 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 NOS3P29474 1203 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PDIA3P30101 505 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GCLCP48506 637 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 METAP2P50579 478 aaKnown RBP eCLIP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 NEK4P51957 841 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 AK2P54819 239 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 HMGCS2P54868 508 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 HERVK_113P62684 666 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 HMGN5P82970 282 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 MAP2K1Q02750 393 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CLCQ05315 142 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CUL4AQ13619 759 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PRKG1Q13976 671 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 COL9A2Q14055 689 aaPredicted RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TTLL4Q14679 1199 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 PWP2Q15269 919 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 NTRK3Q16288 839 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CCL15Q16663 113 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 TKFCQ3LXA3 575 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZC3H12AQ5D1E8 599 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SYDE2Q5VT97 1194 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SLFN13Q68D06 897 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CYP4F22Q6NT55 531 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 GPAT2Q6NUI2 795 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CPLX2Q6PUV4 134 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 SYNE3Q6ZMZ3 975 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 CATSPERGQ6ZRH7 1159 aa2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.53□□□□□ -2
SCARNA16.3-201ENST00000516595 REC114Q7Z4M0 266 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms