RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	SLC26A2	P50443	739 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	BCAR1	P56945	870 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	GPR149	Q86SP6	731 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	TMEM173	Q86WV6	379 aa	Predicted RBP	11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	HELQ	Q8TDG4	1101 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	RSAD2	Q8WXG1	361 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	MYL10	Q9BUA6	226 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	SPTBN2	O15020	2390 aa		11.97	□□□□□ -0.49
CLDND1-231	ENST00000515620	GPR179	Q6PRD1	2367 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	ZBTB42	B2RXF5	422 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	DDX39A	O00148	427 aa	Known RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	C22orf31	O95567	290 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	DCN	P07585	359 aa	Known RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	ZSCAN20	P17040	1043 aa	Predicted RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	TBC1D8B	Q0IIM8	1120 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	ITGB3BP	Q13352	177 aa	Predicted RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	SART3	Q15020	963 aa	Known RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	FAM160B1	Q5W0V3	765 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	METTL13	Q8N6R0	699 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	CTCFL	Q8NI51	663 aa	Predicted RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	MXRA8	Q9BRK3	442 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	MRPL9	Q9BYD2	267 aa	Known RBP	11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	IGSF9	Q9P2J2	1179 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	WNT16	Q9UBV4	365 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	PCDHA6	Q9UN73	950 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	PCDHA8	Q9Y5H6	950 aa		11.96	□□□□□ -0.49
CLDND1-231	ENST00000515620	CACNA1G	O43497	2377 aa		11.96	□□□□□ -0.5
CLDND1-231	ENST00000515620	FRYL	O94915	3013 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	IGKV6D-21	A0A0A0MT36	114 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	HIP1	O00291	1037 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	ATG7	O95352	703 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	PLEKHA8P1	O95397	391 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	CCNE2	O96020	404 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	CTSA	P10619	480 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	KIF5B	P33176	963 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	CLCN3	P51790	818 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	LETM2	Q2VYF4	491 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	ZNF484	Q5JVG2	852 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	PDXDC2P	Q6P474	469 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	RALYL	Q86SE5	291 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	IL25	Q9H293	177 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	AGO4	Q9HCK5	861 aa	Known RBP	11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	IRAK3	Q9Y616	596 aa		11.95	□□□□□ -0.5
CLDND1-231	ENST00000515620	hCG_1642624	A0A1W2PR95	340 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	N4BP1	O75113	896 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	GBP2	P32456	591 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	POLG	P54098	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	GIT2	Q14161	759 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	ST3GAL2	Q16842	350 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	ABHD15	Q6UXT9	468 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	DDX53	Q86TM3	631 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	PPFIBP1	Q86W92	1011 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	C1orf210	Q8IVY1	113 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	CKAP2L	Q8IYA6	745 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	ZNF654	Q8IZM8	581 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	CMTR1	Q8N1G2	835 aa	Known RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	SUMF1	Q8NBK3	374 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	PGBD1	Q96JS3	809 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	ZNF668	Q96K58	619 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	ZNF302	Q9NR11	478 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	NCDN	Q9UBB6	729 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	AKT3	Q9Y243	479 aa		11.94	□□□□□ -0.5
CLDND1-231	ENST00000515620	MAP1B	P46821	2468 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	C2orf16	Q68DN1	1984 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	POTEM	A6NI47	508 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	KIN	O60870	393 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	DDAH1	O94760	285 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	SRF	P11831	508 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	FGFR4	P22455	802 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	KLRC2	P26717	231 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	CLCN4	P51793	760 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	ANTXR2	P58335	489 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	NLRP11	P59045	1033 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	NONO	Q15233	471 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	PTPN14	Q15678	1187 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	POTEG	Q6S5H5	508 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	C15orf39	Q6ZRI6	1047 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	HEATR3	Q7Z4Q2	680 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	ZNF598	Q86UK7	904 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	SRBD1	Q8N5C6	995 aa	Known RBP	11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	GPR152	Q8TDT2	470 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	IGSF21	Q96ID5	467 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	SCLT1	Q96NL6	688 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	MAP7D2	Q96T17	732 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	LZTS2	Q9BRK4	669 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	ARHGEF3	Q9NR81	526 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	DLGAP2	Q9P1A6	1054 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	SIT1	Q9Y3P8	196 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	TAF6L	Q9Y6J9	622 aa		11.93	□□□□□ -0.5
CLDND1-231	ENST00000515620	CLUH	O75153	1309 aa		11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620		A0A0U1RQF3	1178 aa		11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620	SSB	P05455	408 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620	CYP21A2	P08686	494 aa		11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620	ATP4A	P20648	1035 aa		11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620	EIF4B	P23588	611 aa	Known RBP	11.92	□□□□□ -0.5
CLDND1-231	ENST00000515620	LONRF3	Q496Y0	759 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms