RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 KIRREL3Q8IZU9 778 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 HES6Q96HZ4 224 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 FAM84AQ96KN4 292 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 FMO2Q99518 471 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 POP1Q99575 1024 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 PCIF1Q9H4Z3 704 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 MLXIPLQ9NP71 852 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 KLC4Q9NSK0 619 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 DNAJC17Q9NVM6 304 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 AMFRQ9UKV5 643 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 CALCAP01258 141 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 DLG4P78352 724 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 FAM186BQ8IYM0 893 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 KAT5Q92993 513 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 ZKSCAN4Q969J2 545 aaPredicted RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 EIF2AK1Q9BQI3 630 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 GPR88Q9GZN0 384 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 WRAP73Q9P2S5 460 aaPredicted RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 UTP11Q9Y3A2 253 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 ANKRD63C9JTQ0 380 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 SERPINB2P05120 415 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 ATP2B4P23634 1241 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 STAT1P42224 750 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 KCNJ1P48048 391 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 POU5F1Q01860 360 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 FAM228AQ86W67 206 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 EPS8L3Q8TE67 593 aaKnown RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
PHF3-212ENST00000515594 NENFQ9UMX5 172 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 RABGAP1Q9Y3P9 1069 aa14.01□□□□□ -0.17
PHF3-212ENST00000515594 CALUO43852 315 aaPredicted RBP14□□□□□ -0.17
PHF3-212ENST00000515594 RPA1P27694 616 aa14□□□□□ -0.17
PHF3-212ENST00000515594 USP8P40818 1118 aa14□□□□□ -0.17
PHF3-212ENST00000515594 PRKCIP41743 596 aa14□□□□□ -0.17
PHF3-212ENST00000515594 DR1Q01658 176 aa14□□□□□ -0.17
PHF3-212ENST00000515594 MICALCLQ6ZW33 695 aa14□□□□□ -0.17
PHF3-212ENST00000515594 SLFN11Q7Z7L1 901 aa14□□□□□ -0.17
PHF3-212ENST00000515594 HOOK2Q96ED9 719 aa14□□□□□ -0.17
PHF3-212ENST00000515594 FAM163AQ96GL9 167 aaPredicted RBP14□□□□□ -0.17
PHF3-212ENST00000515594 NGLY1Q96IV0 654 aa14□□□□□ -0.17
PHF3-212ENST00000515594 PSMD1Q99460 953 aa14□□□□□ -0.17
PHF3-212ENST00000515594 SEMA4AQ9H3S1 761 aa14□□□□□ -0.17
PHF3-212ENST00000515594 AZI2Q9H6S1 392 aa14□□□□□ -0.17
PHF3-212ENST00000515594 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
PHF3-212ENST00000515594 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
PHF3-212ENST00000515594 CHN1P15882 459 aa14□□□□□ -0.17
PHF3-212ENST00000515594 ZNF76P36508 570 aa14□□□□□ -0.17
PHF3-212ENST00000515594 LRRC14Q15048 493 aa14□□□□□ -0.17
PHF3-212ENST00000515594 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
PHF3-212ENST00000515594 GPATCH4Q5T3I0 446 aaKnown RBP14□□□□□ -0.17
PHF3-212ENST00000515594 RINT1Q6NUQ1 792 aa14□□□□□ -0.17
PHF3-212ENST00000515594 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
PHF3-212ENST00000515594 CCDC25Q86WR0 208 aa14□□□□□ -0.17
PHF3-212ENST00000515594 DYDC2Q96IM9 177 aa14□□□□□ -0.17
PHF3-212ENST00000515594 CEP89Q96ST8 783 aa14□□□□□ -0.17
PHF3-212ENST00000515594 NCAPGQ9BPX3 1015 aa14□□□□□ -0.17
PHF3-212ENST00000515594 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
PHF3-212ENST00000515594 SUCLA2Q9P2R7 463 aaPredicted RBP14□□□□□ -0.17
PHF3-212ENST00000515594 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
PHF3-212ENST00000515594 PLIN4Q96Q06 1357 aa14□□□□□ -0.17
PHF3-212ENST00000515594 BTAF1O14981 1849 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 FOXN3O00409 490 aaPredicted RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 PDXKO00764 312 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 RBM5P52756 815 aaKnown RBP eCLIP13.99□□□□□ -0.17
PHF3-212ENST00000515594 ADCY1Q08828 1119 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 SLC29A2Q14542 456 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 LRIG3Q6UXM1 1119 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 RASGEF1CQ8N431 466 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 MGARPQ8TDB4 240 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 CREB1P16220 341 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 SOX5P35711 763 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 EMC10Q5UCC4 262 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 PPP1R18Q6NYC8 613 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 TTC27Q6P3X3 843 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 PPP4R3CPQ6ZMV5 832 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 PHLDB2Q86SQ0 1253 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 VPS36Q86VN1 386 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 VAV3Q9UKW4 847 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.99□□□□□ -0.17
PHF3-212ENST00000515594 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 PITPNM2Q9BZ72 1349 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 BTNL10A8MVZ5 291 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 RASSF9O75901 435 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 FAM13AO94988 1023 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 FMO5P49326 533 aa13.99□□□□□ -0.17
PHF3-212ENST00000515594 IFI16Q16666 785 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms