RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 USP30Q70CQ3 517 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 LARP4Q71RC2 724 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 KANSL1Q7Z3B3 1105 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 OR5AN1Q8NGI8 311 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 DENND2AQ9ULE3 1009 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 VWA7Q9Y334 891 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 NR2E1Q9Y466 385 aa6.71□□□□□ -1.34
SMARCA5-203ENST00000515531 KDM1AO60341 852 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 H2AFYO75367 372 aaKnown RBP6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 SESN2P58004 480 aaPredicted RBP6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 SESN3P58005 492 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 RAC3P60763 192 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 SLFN13Q68D06 897 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 IQSEC1Q6DN90 963 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 KLHDC10Q6PID8 442 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 UNQ6494/PRO21346Q6UXR6 183 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 BMP8AQ7Z5Y6 402 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 NOL10Q9BSC4 688 aaKnown RBP6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 KIAA1683Q9H0B3 1180 aa6.7□□□□□ -1.34
SMARCA5-203ENST00000515531 LCHNA4D1U4 455 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 ELL2O00472 640 aaPredicted RBP6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 PCDH8O95206 1070 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 CELA3BP08861 270 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 EPHB4P54760 987 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 TMPRSS15P98073 1019 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 ADAM15Q13444 863 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 STAT4Q14765 748 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 ZNF827Q17R98 1081 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 AGBL4Q5VU57 503 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 WDR66Q8TBY9 1149 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 GFM2Q969S9 779 aaKnown RBP6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 HIST1H2AHQ96KK5 128 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 LMF1Q96S06 567 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 HIST1H2AJQ99878 128 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 OR10A2Q9H208 303 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 C12orf65Q9H3J6 166 aaKnown RBP6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 SEMA4AQ9H3S1 761 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 MS4A5Q9H3V2 200 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 SEC61A2Q9H9S3 476 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
SMARCA5-203ENST00000515531 DAPK3O43293 454 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 OPHN1O60890 802 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 CNOT4O95628 575 aaKnown RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 EYA4O95677 639 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 ANTXR2P58335 489 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 FAPQ12884 760 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 ZNF662Q6ZS27 426 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 LIMS2Q7Z4I7 341 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 BCL6BQ8N143 479 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 NEIL1Q96FI4 390 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 LRRC37BQ96QE4 947 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 ANO3Q9BYT9 981 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 PITHD1Q9GZP4 211 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 POLR3BQ9NW08 1133 aaPredicted RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 PPP4R1LQ9P1A2 415 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 PUF60Q9UHX1 559 aaKnown RBP6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 MCM8Q9UJA3 840 aa6.68□□□□□ -1.34
SMARCA5-203ENST00000515531 A0A0A6YYJ9 748 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 K7ESM1 405 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 ARHGAP6O43182 974 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 ITGB3P05106 788 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 RNF219Q5W0B1 726 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 CXorf67Q86X51 503 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 CIR1Q86X95 450 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 CLRN3Q8NCR9 226 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 GIMAP8Q8ND71 665 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 GCDHQ92947 438 aaPredicted RBP6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 LPPQ93052 612 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 WDR92Q96MX6 357 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 PTPN18Q99952 460 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 WNT8AQ9H1J5 351 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 DNAI1Q9UI46 699 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 USP18Q9UMW8 372 aa6.67□□□□□ -1.34
SMARCA5-203ENST00000515531 PRSS38A1L453 326 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 CR2P20023 1033 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 XPAP23025 273 aaPredicted RBP6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 NFYCQ13952 458 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 TBR1Q16650 682 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 MAN2A1Q16706 1144 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 ZBTB41Q5SVQ8 909 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 TAX1BP1Q86VP1 789 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 SPATS2Q86XZ4 545 aaKnown RBP6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 CDYL2Q8N8U2 506 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 OR14K1Q8NGZ2 314 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 NUMBLQ9Y6R0 609 aa6.66□□□□□ -1.34
SMARCA5-203ENST00000515531 GPR39O43194 453 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CDC14BO60729 498 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CLEC2LP0C7M8 214 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CCDC62Q6P9F0 684 aa6.65□□□□□ -1.34
SMARCA5-203ENST00000515531 CHST13Q8NET6 341 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms