RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TACO1Q9BSH4 297 aaKnown RBP4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 POLR3GLQ9BT43 218 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 CDH19Q9H159 772 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 OR10A5Q9H207 317 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 DEF6Q9H4E7 631 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 SMURF1Q9HCE7 757 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 WASF3Q9UPY6 502 aa4.53□□□□□ -1.68
CALCOCO2-223ENST00000514267 TCRBV5S4A2TA0A5A2 114 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 SHTN1A0MZ66 631 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 PMS2P1A4D2B8 440 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 PATE3B3GLJ2 98 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 GABRDO14764 452 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 AKAP10O43572 662 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 FKBP9O95302 570 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 MAP4K4O95819 1239 aaPredicted RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 SCGB1D2O95969 90 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 HMGCRP04035 888 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF20P17024 532 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 RPS19P39019 145 aaKnown RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ADCYAP1R1P41586 468 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ECE1P42892 770 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 MECP2P51608 486 aaKnown RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 JAM2P57087 298 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 IL2P60568 153 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 NFYCQ13952 458 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ATP13A4Q4VNC1 1196 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 TMEM177Q53S58 311 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 NXNQ6DKJ4 435 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 FKBP9P1Q75LS8 142 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZBTB46Q86UZ6 589 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 RBM12BQ8IXT5 1001 aaKnown RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 CHPFQ8IZ52 775 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 HIPK4Q8NE63 616 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 TSR2Q969E8 191 aaKnown RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 C8orf49Q96NF6 230 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 SSBP3Q9BWW4 388 aaPredicted RBP4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 SLC39A2Q9NP94 309 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ACSS2Q9NR19 701 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZIM2Q9NZV7 527 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 TRHDEQ9UKU6 1024 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 VWA7Q9Y334 891 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 TESMINQ9Y4I5 508 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 B3GALT1Q9Y5Z6 326 aa4.52□□□□□ -1.69
CALCOCO2-223ENST00000514267 A0A0G2JNJ9 132 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF891A8MT65 544 aaPredicted RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 M0R2C6 588 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 TRAF5O00463 557 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 CAND2O75155 1236 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 RFPL1O75677 317 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 CNOT4O95628 575 aaKnown RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 IL18BPO95998 194 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 U2AF1L5P0DN76 240 aaPredicted RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 APEX1P27695 318 aaKnown RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 GNALP38405 381 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 SESN3P58005 492 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 KRT85P78386 507 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 U2AF1Q01081 240 aaKnown RBP eCLIP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 EIF4HQ15056 248 aaKnown RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 IQSEC1Q6DN90 963 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 USP51Q70EK9 711 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 OTOP1Q7RTM1 612 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 OVCH1Q7RTY7 1134 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 NOSTRINQ8IVI9 506 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 CISD2Q8N5K1 135 aaKnown RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 GIMAP8Q8ND71 665 aaPredicted RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 DLG3Q92796 817 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 NEIL1Q96FI4 390 aaPredicted RBP4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 PSMD1Q99460 953 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 FOXB1Q99853 325 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 TRIM8Q9BZR9 551 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 SLC13A1Q9BZW2 595 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZDHHC5Q9C0B5 715 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 KLC2Q9H0B6 622 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 MEGF9Q9H1U4 602 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 NELFAQ9H3P2 528 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 TCF7L1Q9HCS4 588 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 AASDHPPTQ9NRN7 309 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 BTBD7Q9P203 1132 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 RBPJLQ9UBG7 517 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 GABBR1Q9UBS5 961 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 Q9UFV3 132 aa4.51□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 GOLGA6CA6NDK9 693 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 GOLGA6BA6NDN3 693 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 H7C1D1 291 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 MUSKO15146 869 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 PRKD3O94806 890 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 ABLIM3O94929 683 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 CYP17A1P05093 508 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 GOLGA6DP0CG33 693 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 ID4P47928 161 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 IL13RA1P78552 427 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 IRF9Q00978 393 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 ROM1Q03395 351 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF174Q15697 407 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 FAM102BQ5T8I3 360 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 TMEM200BQ69YZ2 307 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 GRAMD4Q6IC98 578 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms