RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
VCAN-211ENST00000513984 FAM102BQ5T8I3 360 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 KIFAP3Q92845 792 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 HVCN1Q96D96 273 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 CEP170P1Q96L14 293 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 IRX2Q9BZI1 471 aaPredicted RBP16.38■□□□□ 0.21
VCAN-211ENST00000513984 HAUS4Q9H6D7 363 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
VCAN-211ENST00000513984 DGAT1O75907 488 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
VCAN-211ENST00000513984 LCA5LO95447 670 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 UBA1P22314 1058 aaKnown RBP16.37■□□□□ 0.21
VCAN-211ENST00000513984 PEX3P56589 373 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 POLR2FP61218 127 aaKnown RBP16.37■□□□□ 0.21
VCAN-211ENST00000513984 SP4Q02446 784 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 PPP2R5AQ15172 486 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 Q3C1V9 767 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 XKR3Q5GH77 459 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 TCERG1LQ5VWI1 586 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 CYFIP1Q7L576 1253 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
VCAN-211ENST00000513984 MAFBQ9Y5Q3 323 aaPredicted RBP16.37■□□□□ 0.21
VCAN-211ENST00000513984 DNAJC25-GNG10A0A024R161 153 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 IGKV6D-21A0A0A0MT36 114 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 IPO7O95373 1038 aaKnown RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 PLEKP08567 350 aaPredicted RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 TGFB3P10600 412 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 CYP2J2P51589 502 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 RTP1P59025 263 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 EXOC3L4Q17RC7 722 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 TRMT1LQ7Z2T5 733 aaKnown RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 MCPH1Q8NEM0 835 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 GTF3C2Q8WUA4 911 aaPredicted RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 SPIRE2Q8WWL2 714 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 TSC1Q92574 1164 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 SLC10A4Q96EP9 437 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 FGD4Q96M96 766 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 NLRC4Q9NPP4 1024 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 CYP26B1Q9NR63 512 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
VCAN-211ENST00000513984 ZNF215Q9UL58 517 aaPredicted RBP16.36■□□□□ 0.21
VCAN-211ENST00000513984 SSU72P8A0A1W2PR75 194 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 SLC16A4O15374 487 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 ABL1P00519 1130 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 POTEJP0CG39 1038 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 PON1P27169 355 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 SMTNP53814 917 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 DMP1Q13316 513 aaPredicted RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 SFMBT2Q5VUG0 894 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 HGSNATQ68CP4 663 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 TMEM161BQ8NDZ6 487 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 SHCBP1Q8NEM2 672 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 ERO1AQ96HE7 468 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 MPHOSPH6Q99547 160 aaKnown RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 NTPCRQ9BSD7 190 aaKnown RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 MROH8Q9H579 483 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 ZNF302Q9NR11 478 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 MYH10P35580 1976 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 URI1O94763 535 aaPredicted RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 SLC9A1P19634 815 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
VCAN-211ENST00000513984 NPTX2P47972 431 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 KIF11P52732 1056 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 APBA1Q02410 837 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 NEDD9Q14511 834 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 MMP19Q99542 508 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 ATP6V0A4Q9HBG4 840 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 XPNPEP1Q9NQW7 623 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 AIPL1Q9NZN9 384 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
VCAN-211ENST00000513984 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 ZNF263O14978 683 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 MAPK13O15264 365 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 SORBS3O60504 671 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 TLR2O60603 784 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 EXOC3O60645 756 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 SERPING1P05155 500 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 UCHL3P15374 230 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 ATP4AP20648 1035 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 KCTD2Q14681 263 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
VCAN-211ENST00000513984 ASTE1Q2TB18 679 aaPredicted RBP16.34■□□□□ 0.21
VCAN-211ENST00000513984 ZNF569Q5MCW4 686 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 MAP1SQ66K74 1059 aaPredicted RBP16.34■□□□□ 0.21
VCAN-211ENST00000513984 KIAA1328Q86T90 577 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 MAP4K3Q8IVH8 894 aa16.34■□□□□ 0.21
VCAN-211ENST00000513984 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms