RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 FGFR4P22455 802 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 CDK17Q00537 523 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 ZNF662Q6ZS27 426 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 TRPM8Q7Z2W7 1104 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 KCNK18Q7Z418 384 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 NEK9Q8TD19 979 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 MRRFQ96E11 262 aaKnown RBP10.44□□□□□ -0.74
VCAN-210ENST00000513960 CEP72Q9P209 647 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 AMFRQ9UKV5 643 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 KIAA1024Q9UPX6 916 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 ATXN2Q99700 1313 aaKnown RBP10.44□□□□□ -0.74
VCAN-210ENST00000513960 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
VCAN-210ENST00000513960 A8MUI8 341 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L15C9J2P7 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 H2AFZP0C0S5 128 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 MXRA7P84157 204 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 FKBP3Q00688 224 aaKnown RBP10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 SLC18A3Q16572 532 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 WLSQ5T9L3 541 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 MEI1Q5TIA1 1274 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 USP17L6PQ6QN14 398 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 H2AFVQ71UI9 128 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 PARD3BQ8TEW8 1205 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 GLG1Q92896 1179 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 FAXDC2Q96IV6 333 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 CNOT10Q9H9A5 744 aaKnown RBP10.44□□□□□ -0.74
VCAN-210ENST00000513960 DAAM1Q9Y4D1 1078 aa10.44□□□□□ -0.74
VCAN-210ENST00000513960 PPP1R11O60927 126 aaPredicted RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 SHBGP04278 402 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 NFIAQ12857 509 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 ADAM9Q13443 819 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 CERKLQ49MI3 558 aaPredicted RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 TMEM119Q4V9L6 283 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 VSIG1Q86XK7 387 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 FBF1Q8TES7 1133 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
VCAN-210ENST00000513960 LY75O60449 1722 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 THSD7AQ9UPZ6 1657 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 ABCB11O95342 1321 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 CCDC169A6NNP5 214 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 FLOT1O75955 427 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 DRD4P21917 467 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 TNFRSF8P28908 595 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 CRKP46108 304 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 IFI35P80217 286 aaPredicted RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 COASYQ13057 564 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 C6orf89Q6UWU4 347 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 CD302Q8IX05 232 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 PROM2Q8N271 834 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 SLC17A8Q8NDX2 589 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 IFT74Q96LB3 600 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 INPP4AQ96PE3 977 aaPredicted RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 RAB17Q9H0T7 212 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 FGFR1OP2Q9NVK5 253 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 TBK1Q9UHD2 729 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 C15orf41Q9Y2V0 281 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 GSTTP1A0A1W2PQM5 241 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 SSU72P8A0A1W2PR75 194 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 HIP1RO75146 1068 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 VPS41P49754 854 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 QRICH1Q2TAL8 776 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 FAM47EQ6ZV65 393 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 HAS1Q92839 578 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 HOOK2Q96ED9 719 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 PBKQ96KB5 322 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 DBNDD1Q9H9R9 158 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 MTRF1LQ9UGC7 380 aaKnown RBP10.43□□□□□ -0.74
VCAN-210ENST00000513960 RASAL2Q9UJF2 1139 aa10.43□□□□□ -0.74
VCAN-210ENST00000513960 CCDC189A1A4V9 331 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 EME2A4GXA9 379 aaPredicted RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 E9PMD0 336 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 CACNB3P54284 484 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 DR1Q01658 176 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 PTK2Q05397 1052 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 CCDC6Q16204 474 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 AGBL2Q5U5Z8 902 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 APOBEC3HQ6NTF7 200 aaKnown RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 INTS8Q75QN2 995 aaKnown RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 BAP1Q92560 729 aa10.42□□□□□ -0.74
VCAN-210ENST00000513960 NUCKS1Q9H1E3 243 aaKnown RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
VCAN-210ENST00000513960 LRRC4CQ9HCJ2 640 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms