RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 RSPH1Q8WYR4 309 aa13.73□□□□□ -0.21
PTPN20-229ENST00000513756 PPP1R16BQ96T49 567 aa13.73□□□□□ -0.21
PTPN20-229ENST00000513756 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
PTPN20-229ENST00000513756 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
PTPN20-229ENST00000513756 EVPLQ92817 2033 aa13.73□□□□□ -0.21
PTPN20-229ENST00000513756 VTNP04004 478 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 CTSAP10619 480 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 RSPO4Q2I0M5 234 aaPredicted RBP13.72□□□□□ -0.21
PTPN20-229ENST00000513756 CLLU1OSQ5K130 101 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 PDXDC2PQ6P474 469 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
PTPN20-229ENST00000513756 METTL13Q8N6R0 699 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 NCOA7Q8NI08 942 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 HELQQ8TDG4 1101 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 RIN2Q8WYP3 895 aaPredicted RBP13.72□□□□□ -0.21
PTPN20-229ENST00000513756 BORCS6Q96GS4 357 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 ZNF302Q9NR11 478 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 STK39Q9UEW8 545 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 DENND4AQ7Z401 1863 aa13.72□□□□□ -0.21
PTPN20-229ENST00000513756 A0A0U1RQF3 1178 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 DDAH1O94760 285 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 C22orf31O95567 290 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 CEP55Q53EZ4 464 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 ABHD15Q6UXT9 468 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 C15orf39Q6ZRI6 1047 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 CKAP2LQ8IYA6 745 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 EMILIN2Q9BXX0 1053 aa13.71□□□□□ -0.21
PTPN20-229ENST00000513756 AGO4Q9HCK5 861 aaKnown RBP13.71□□□□□ -0.21
PTPN20-229ENST00000513756 OTOGLQ3ZCN5 2332 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 ACACBO00763 2458 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 KRBA1A5PL33 1030 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 ZBTB42B2RXF5 422 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 MAGEB2O15479 319 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 CFHP08603 1231 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 SP9P0CG40 484 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 ARP10275 920 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
PTPN20-229ENST00000513756 TMOD1P28289 359 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-229ENST00000513756 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 C1orf210Q8IVY1 113 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 TEX2Q8IWB9 1127 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 ZNF654Q8IZM8 581 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 GPR161Q8N6U8 529 aaKnown RBP13.7□□□□□ -0.22
PTPN20-229ENST00000513756 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
PTPN20-229ENST00000513756 STAMQ92783 540 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 MAP7D2Q96T17 732 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 TBC1D17Q9HA65 648 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 SIT1Q9Y3P8 196 aa13.7□□□□□ -0.22
PTPN20-229ENST00000513756 NARSO43776 548 aaKnown RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 ZC3H11AO75152 810 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 CYP21A2P08686 494 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 SRFP11831 508 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 KLRC2P26717 231 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 SPECC1Q5M775 1068 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 CCDC60Q8IWA6 550 aaPredicted RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 PLEKHM2Q8IWE5 1019 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
PTPN20-229ENST00000513756 IGDCC4Q8TDY8 1250 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 IGSF21Q96ID5 467 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 CA14Q9ULX7 337 aa13.69□□□□□ -0.22
PTPN20-229ENST00000513756 E7EWF7 191 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
PTPN20-229ENST00000513756 MEIS1O00470 390 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 CCNE2O96020 404 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 DCNP07585 359 aaKnown RBP13.68□□□□□ -0.22
PTPN20-229ENST00000513756 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
PTPN20-229ENST00000513756 ZNF76P36508 570 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 CLCN4P51793 760 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 KIAA0319Q5VV43 1072 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 DCLK2Q8N568 766 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 ADAMTS10Q9H324 1103 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
PTPN20-229ENST00000513756 CALM1P0DP23 149 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 CALM2P0DP24 149 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 CALM3P0DP25 149 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 SKIP12755 728 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 ATP4AP20648 1035 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 CLCN3P51790 818 aa13.67□□□□□ -0.22
PTPN20-229ENST00000513756 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
PTPN20-229ENST00000513756 PTPN14Q15678 1187 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms