RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TMEM173Q86WV6 379 aaPredicted RBP11.97□□□□□ -0.49
CLDND1-227ENST00000513452 HELQQ8TDG4 1101 aa11.97□□□□□ -0.49
CLDND1-227ENST00000513452 RSAD2Q8WXG1 361 aa11.97□□□□□ -0.49
CLDND1-227ENST00000513452 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
CLDND1-227ENST00000513452 SPTBN2O15020 2390 aa11.97□□□□□ -0.49
CLDND1-227ENST00000513452 GPR179Q6PRD1 2367 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 ZBTB42B2RXF5 422 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 DDX39AO00148 427 aaKnown RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 ZC3H11AO75152 810 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 C22orf31O95567 290 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 DCNP07585 359 aaKnown RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 ZSCAN20P17040 1043 aaPredicted RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 ITGB3BPQ13352 177 aaPredicted RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 SART3Q15020 963 aaKnown RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 FAM160B1Q5W0V3 765 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 METTL13Q8N6R0 699 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 CTCFLQ8NI51 663 aaPredicted RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.49
CLDND1-227ENST00000513452 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 WNT16Q9UBV4 365 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
CLDND1-227ENST00000513452 CACNA1GO43497 2377 aa11.96□□□□□ -0.5
CLDND1-227ENST00000513452 FRYLO94915 3013 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 IGKV6D-21A0A0A0MT36 114 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 HIP1O00291 1037 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 ATG7O95352 703 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 PLEKHA8P1O95397 391 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 CCNE2O96020 404 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 CTSAP10619 480 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 KIF5BP33176 963 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 CLCN3P51790 818 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 ZNF484Q5JVG2 852 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 PDXDC2PQ6P474 469 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 TRMT1LQ7Z2T5 733 aaKnown RBP11.95□□□□□ -0.5
CLDND1-227ENST00000513452 RALYLQ86SE5 291 aaKnown RBP11.95□□□□□ -0.5
CLDND1-227ENST00000513452 CCDC60Q8IWA6 550 aaPredicted RBP11.95□□□□□ -0.5
CLDND1-227ENST00000513452 IL25Q9H293 177 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
CLDND1-227ENST00000513452 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
CLDND1-227ENST00000513452 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 GBP2P32456 591 aaPredicted RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 GIT2Q14161 759 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 ST3GAL2Q16842 350 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 DDX53Q86TM3 631 aaKnown RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 PPFIBP1Q86W92 1011 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 C1orf210Q8IVY1 113 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 ZNF654Q8IZM8 581 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 SUMF1Q8NBK3 374 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 BCL7CQ8WUZ0 217 aaPredicted RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 ZNF668Q96K58 619 aaPredicted RBP11.94□□□□□ -0.5
CLDND1-227ENST00000513452 ZNF302Q9NR11 478 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
CLDND1-227ENST00000513452 MAP1BP46821 2468 aaKnown RBP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 C2orf16Q68DN1 1984 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 POTEMA6NI47 508 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 DDAH1O94760 285 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 SRFP11831 508 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 FGFR4P22455 802 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 KLRC2P26717 231 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 CLCN4P51793 760 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 ANTXR2P58335 489 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 NLRP11P59045 1033 aaKnown RBP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 NONOQ15233 471 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 C15orf39Q6ZRI6 1047 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 HEATR3Q7Z4Q2 680 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
CLDND1-227ENST00000513452 GPR152Q8TDT2 470 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 IGSF21Q96ID5 467 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 SCLT1Q96NL6 688 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 MAP7D2Q96T17 732 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 LZTS2Q9BRK4 669 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 ARHGEF3Q9NR81 526 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 DLGAP2Q9P1A6 1054 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 SIT1Q9Y3P8 196 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 TAF6LQ9Y6J9 622 aa11.93□□□□□ -0.5
CLDND1-227ENST00000513452 CLUHO75153 1309 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 A0A0U1RQF3 1178 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLDND1-227ENST00000513452 CYP21A2P08686 494 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 ATP4AP20648 1035 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 EIF4BP23588 611 aaKnown RBP11.92□□□□□ -0.5
CLDND1-227ENST00000513452 LONRF3Q496Y0 759 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 CEP55Q53EZ4 464 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 SWSAP1Q6NVH7 229 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms