RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 RPP25Q9BUL9 199 aaKnown RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
PTPN20-228ENST00000513266 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 PCDHA1Q9Y5I3 950 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 CLUHO75153 1309 aa11.07□□□□□ -0.64
PTPN20-228ENST00000513266 FGRP09769 529 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 CTSAP10619 480 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 LAMP2P13473 410 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 INSRRP14616 1297 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 CD72P21854 359 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 TCF7P36402 384 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 RBM25P49756 843 aaKnown RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 CLCN4P51793 760 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 KRT76Q01546 638 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 BMS1Q14692 1282 aaKnown RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 CCDC6Q16204 474 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 ZCCHC14Q8WYQ9 949 aaKnown RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 INPP4AQ96PE3 977 aaPredicted RBP11.06□□□□□ -0.64
PTPN20-228ENST00000513266 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 CDHR5Q9HBB8 845 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 RXFP3Q9NSD7 469 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 ST3GAL5Q9UNP4 418 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 NUMBLQ9Y6R0 609 aa11.06□□□□□ -0.64
PTPN20-228ENST00000513266 RPS6KA5O75582 802 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 PRKCQQ04759 706 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 GIT2Q14161 759 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 DSC3Q14574 896 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 CMASQ8NFW8 434 aaPredicted RBP11.05□□□□□ -0.64
PTPN20-228ENST00000513266 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 STAMQ92783 540 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 ANAPC4Q9UJX5 808 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 LAMA5O15230 3695 aa11.05□□□□□ -0.64
PTPN20-228ENST00000513266 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 HOXA2O43364 376 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 FIBPO43427 364 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 ZFYP08048 801 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 RLBP1P12271 317 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 TARSP26639 723 aaKnown RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 BCAR1P56945 870 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 MTAPQ13126 283 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 FZD5Q13467 585 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 SLC44A4Q53GD3 710 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 ZBTB41Q5SVQ8 909 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 BCL7CQ8WUZ0 217 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 LSM14BQ9BX40 385 aaKnown RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 JMJD4Q9H9V9 463 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
PTPN20-228ENST00000513266 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 GINS2Q9Y248 185 aa11.04□□□□□ -0.64
PTPN20-228ENST00000513266 TENM4Q6N022 2769 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 PPP1R11O60927 126 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 CNPP09543 421 aaKnown RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 FOXC1Q12948 553 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 SF3A2Q15428 464 aaKnown RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 AASDHQ4L235 1098 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 STPG1Q5TH74 334 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 DDX53Q86TM3 631 aaKnown RBP11.03□□□□□ -0.64
PTPN20-228ENST00000513266 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 ABI1Q8IZP0 508 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 FGF14Q92915 247 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 TTC14Q96N46 770 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 KLHL5Q96PQ7 755 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 SENP7Q9BQF6 1050 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 MAN1C1Q9NR34 630 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 TOMM22Q9NS69 142 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 FREM2Q5SZK8 3169 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 ASXL3Q9C0F0 2248 aa11.03□□□□□ -0.64
PTPN20-228ENST00000513266 SMIM35A0A1B0GVV1 85 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 GIPC1O14908 333 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 HRO43593 1189 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 RFPL2O75678 378 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 KLRC2P26717 231 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 ALDH7A1P49419 539 aaKnown RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 NRLP54845 237 aa11.02□□□□□ -0.65
PTPN20-228ENST00000513266 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-228ENST00000513266 FAM228AQ86W67 206 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms