RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 AGBL4Q5VU57 503 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 FILIP1Q7Z7B0 1213 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 SSBP3Q9BWW4 388 aaPredicted RBP6.37□□□□□ -1.39
CHD1-210ENST00000513064 OR10A2Q9H208 303 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 MTG2Q9H4K7 406 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 PPP4R1LQ9P1A2 415 aa6.37□□□□□ -1.39
CHD1-210ENST00000513064 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
CHD1-210ENST00000513064 LCHNA4D1U4 455 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 RAB11FIP3O75154 756 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 ITGB3P05106 788 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 MEOX1P50221 254 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 NFYCQ13952 458 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 SLFN13Q68D06 897 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 CLRN3Q8NCR9 226 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 KIAA1683Q9H0B3 1180 aa6.36□□□□□ -1.39
CHD1-210ENST00000513064 CNOT11Q9UKZ1 510 aaKnown RBP6.36□□□□□ -1.39
CHD1-210ENST00000513064 NOC2LQ9Y3T9 749 aaKnown RBP6.36□□□□□ -1.39
CHD1-210ENST00000513064 ZNF536O15090 1300 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 KDM1AO60341 852 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 OPHN1O60890 802 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 RRADP55042 308 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 SESN2P58004 480 aaPredicted RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 TBR1Q16650 682 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 ZNF568Q3ZCX4 644 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 ZBTB41Q5SVQ8 909 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 KLHDC10Q6PID8 442 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 USP30Q70CQ3 517 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 NKD2Q969F2 451 aaPredicted RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 GFM2Q969S9 779 aaKnown RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 PTPN18Q99952 460 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 BDH2Q9BUT1 245 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 FAM126AQ9BYI3 521 aaPredicted RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 WNT8AQ9H1J5 351 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 MEGF9Q9H1U4 602 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 MAGEL2Q9UJ55 1249 aa6.35□□□□□ -1.39
CHD1-210ENST00000513064 CTDP1Q9Y5B0 961 aaPredicted RBP6.35□□□□□ -1.39
CHD1-210ENST00000513064 MYPNQ86TC9 1320 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 GPR39O43194 453 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 SYN1P17600 705 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 MANFP55145 182 aaKnown RBP6.34□□□□□ -1.39
CHD1-210ENST00000513064 RAC3P60763 192 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 HGFACQ04756 655 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 PDCD1Q15116 288 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 LHFPL2Q6ZUX7 228 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 WDR66Q8TBY9 1149 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 DYDC2Q96IM9 177 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 JADE2Q9NQC1 790 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 TOPORSQ9NS56 1045 aaPredicted RBP6.34□□□□□ -1.39
CHD1-210ENST00000513064 KCNG1Q9UIX4 513 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 TMPRSS11EQ9UL52 423 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 SYNPO2Q9UMS6 1093 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 NR2E1Q9Y466 385 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 NUMBLQ9Y6R0 609 aa6.34□□□□□ -1.39
CHD1-210ENST00000513064 PRSS38A1L453 326 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 NPEPPSL1A6NEC2 478 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 KRTAP9-7A8MTY7 169 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 MATN2O00339 956 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 H2AFYO75367 372 aaKnown RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 PFKMP08237 780 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 PLP2Q04941 152 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 RNF219Q5W0B1 726 aaPredicted RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 GLB1LQ6UWU2 654 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 HDGFL2Q7Z4V5 671 aaPredicted RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 DDX42Q86XP3 938 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD1-210ENST00000513064 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 ATL2Q8NHH9 583 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 CFHR4Q92496 578 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 LPPQ93052 612 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 FERMT2Q96AC1 680 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 NEIL1Q96FI4 390 aaPredicted RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 WDR92Q96MX6 357 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 LMF1Q96S06 567 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 NOL10Q9BSC4 688 aaKnown RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 ANO3Q9BYT9 981 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 OSBPL6Q9BZF3 934 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 MSL2Q9HCI7 577 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 POLR3BQ9NW08 1133 aaPredicted RBP6.33□□□□□ -1.4
CHD1-210ENST00000513064 ATP8A1Q9Y2Q0 1164 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 PPP2R3BQ9Y5P8 575 aa6.33□□□□□ -1.4
CHD1-210ENST00000513064 PHLDB1Q86UU1 1377 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 A0A0A6YYK5 440 aaPredicted RBP6.32□□□□□ -1.4
CHD1-210ENST00000513064 ST20-MTHFSA0A0A6YYL1 179 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 PMS2P1A4D2B8 440 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 GPR42O15529 346 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 PCDH8O95206 1070 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 CELA3BP08861 270 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 TMPRSS15P98073 1019 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 FAPQ12884 760 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 ADAM15Q13444 863 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 IQSEC1Q6DN90 963 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 PPP1R14CQ8TAE6 165 aa6.32□□□□□ -1.4
CHD1-210ENST00000513064 RSAD2Q8WXG1 361 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms