RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TBXAS1P24557 533 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 KRT80Q6KB66 452 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 CCDC124Q96CT7 223 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 MORC2Q9Y6X9 1032 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 RAD17O75943 681 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CHEK2O96017 543 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 XPAP23025 273 aaPredicted RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 SFNP31947 248 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CASP2P42575 452 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 GCLMP48507 274 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 TRIM28Q13263 835 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CLDN3O15551 220 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 TMPRSS15P98073 1019 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 ENOSF1Q7L5Y1 443 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 ZNF341Q9BYN7 854 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 DNAJC17Q9NVM6 304 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 ABCB11O95342 1321 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MYO3BQ8WXR4 1341 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MYBL1P10243 752 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 USP11P51784 963 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 RNF139Q8WU17 664 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CD209Q9NNX6 404 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MROH7-TTC4A0A0A0MT08 1334 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CRKP46108 304 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 TAC1P20366 129 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 VAMP7P51809 220 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 GYS2P54840 703 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MAGOHP61326 146 aaKnown RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 CIAPIN1Q6FI81 312 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
COL11A1-210ENST00000512756 HSPH1Q92598 858 aa13.34□□□□□ -0.27
COL11A1-210ENST00000512756 SPATA31A3Q5VYP0 1347 aa13.33□□□□□ -0.27
COL11A1-210ENST00000512756 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 POTECB2RU33 542 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 HSPA4LO95757 839 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 ZNF18P17022 549 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 MRPS25P82663 173 aaKnown RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 MAPK6Q16659 721 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 FSCBQ5H9T9 825 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 LIMA1Q9UHB6 759 aaKnown RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 CPDO75976 1380 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 GSTA4O15217 222 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 TADA3O75528 432 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 PAMP19021 973 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 PDCD2Q16342 344 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 PODNQ7Z5L7 613 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 NLRP4Q96MN2 994 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 RMDN3Q96TC7 470 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 FAM8A1Q9UBU6 413 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 TRIM72Q6ZMU5 477 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 COG1Q8WTW3 980 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 TTC17Q96AE7 1141 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 INTS2Q9H0H0 1204 aaKnown RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 GYG2O15488 501 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 STXBP2Q15833 593 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 PDXDC1Q6P996 788 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 DYDC2Q96IM9 177 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 ATP6V1G3Q96LB4 118 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 TRIM15Q9C019 465 aa13.33□□□□□ -0.28
COL11A1-210ENST00000512756 APOBEC2Q9Y235 224 aaKnown RBP13.33□□□□□ -0.28
COL11A1-210ENST00000512756 A0A0G2JND7 137 aa13.32□□□□□ -0.28
COL11A1-210ENST00000512756 USP17L10C9JJH3 530 aa13.32□□□□□ -0.28
COL11A1-210ENST00000512756 F8W8V4 182 aa13.32□□□□□ -0.28
COL11A1-210ENST00000512756 DHX34Q14147 1143 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms