RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 VAV3Q9UKW4 847 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 IGKV6-21A0A0C4DH24 114 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 TBKBP1A7MCY6 615 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 FGFR4P22455 802 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 NAALADL2Q58DX5 795 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 FAM178BQ8IXR5 827 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 HAS1Q92839 578 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
COL1A1-213ENST00000511732 RNF19AQ9NV58 838 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 TMEM161AQ9NX61 479 aa17.22■□□□□ 0.35
COL1A1-213ENST00000511732 LINC01565O15544 149 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
COL1A1-213ENST00000511732 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
COL1A1-213ENST00000511732 DARSP14868 501 aaKnown RBP17.21■□□□□ 0.35
COL1A1-213ENST00000511732 XBP1P17861 261 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 NR5A1Q13285 461 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 PPP2R5CQ13362 524 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 ANO5Q75V66 913 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 ADGRD2Q7Z7M1 963 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 CWH43Q9H720 699 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 TYW1Q9NV66 732 aaKnown RBP17.21■□□□□ 0.35
COL1A1-213ENST00000511732 WRAP73Q9P2S5 460 aaPredicted RBP17.21■□□□□ 0.35
COL1A1-213ENST00000511732 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
COL1A1-213ENST00000511732 DDX11L8A8MPP1 907 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 PSMC5P62195 406 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 PLA2G4FQ68DD2 849 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 LRRC55Q6ZSA7 311 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 ZNF710Q8N1W2 664 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
COL1A1-213ENST00000511732 TNFRSF25Q93038 417 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 FAM20AQ96MK3 541 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 CASD1Q96PB1 797 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 RAPGEFL1Q9UHV5 662 aa17.2■□□□□ 0.34
COL1A1-213ENST00000511732 TBX10O75333 385 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 COL9A1P20849 921 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 ADAM15Q13444 863 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 PUS10Q3MIT2 529 aaKnown RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 SPOUT1Q5T280 376 aaKnown RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 NLRP7Q8WX94 980 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
COL1A1-213ENST00000511732 NCOR1O75376 2440 aa17.19■□□□□ 0.34
COL1A1-213ENST00000511732 A0A087WZ62 844 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 NCK2O43639 380 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 JAK2O60674 1132 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 GCFC2P16383 781 aaKnown RBP17.18■□□□□ 0.34
COL1A1-213ENST00000511732 KRT2P35908 639 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 QARSP47897 775 aaKnown RBP17.18■□□□□ 0.34
COL1A1-213ENST00000511732 NEK4P51957 841 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 NPEPPSP55786 919 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 SPIRE1Q08AE8 756 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 CLUL1Q15846 466 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 GJD3Q8N144 294 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 COLGALT1Q8NBJ5 622 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-213ENST00000511732 TMEM117Q9H0C3 514 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-213ENST00000511732 PCDHB12Q9Y5F1 795 aa17.18■□□□□ 0.34
COL1A1-213ENST00000511732 WNT7AO00755 349 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 TBX3O15119 743 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 FGF18O76093 207 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
COL1A1-213ENST00000511732 ATF7P17544 494 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-213ENST00000511732 ERVFC1P60507 584 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 CLLU1OSQ5K130 101 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 ZNF598Q86UK7 904 aaKnown RBP17.17■□□□□ 0.34
COL1A1-213ENST00000511732 RHPN2Q8IUC4 686 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 WASF1Q92558 559 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 GCOM2Q9BZD3 368 aaPredicted RBP17.17■□□□□ 0.34
COL1A1-213ENST00000511732 CYP26B1Q9NR63 512 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 AAASQ9NRG9 546 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 RGL1Q9NZL6 768 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
COL1A1-213ENST00000511732 A0A0U1RQF3 1178 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 ZBTB39O15060 712 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 MBTPS2O43462 519 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 FOSBP53539 338 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 EPHA7Q15375 998 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 RBM23Q86U06 439 aaKnown RBP17.16■□□□□ 0.34
COL1A1-213ENST00000511732 MSLNLQ96KJ4 702 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 LXNQ9BS40 222 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 C1QTNF1Q9BXJ1 281 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 C11orf16Q9NQ32 467 aa17.16■□□□□ 0.34
COL1A1-213ENST00000511732 CLEC1BQ9P126 229 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms