RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 DTNBO60941 627 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 MED26O95402 600 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 IFIT2P09913 472 aaKnown RBP6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 LGALS4P56470 323 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 KIF23Q02241 960 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRAMEF18Q5VWM3 479 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 UNQ6494/PRO21346Q6UXR6 183 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 OVCH2Q7RTZ1 564 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZBTB34Q8NCN2 500 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 FLCNQ8NFG4 579 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 CALML6Q8TD86 181 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 TOE1Q96GM8 510 aaKnown RBP6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 AMNQ9BXJ7 453 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 HAPLN2Q9GZV7 340 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 DPP7Q9UHL4 492 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 ADAMTS6Q9UKP5 1117 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 CTNND2Q9UQB3 1225 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 IPPQ9Y573 584 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 MYPNQ86TC9 1320 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 A0A0A6YYJ9 748 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZNF839A8K0R7 811 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 MAFGO15525 162 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 MC4RP32245 332 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 NEK3P51956 506 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 MALLQ13021 153 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 C4orf46Q504U0 113 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRAMEF9Q5VWM5 478 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 TEPPQ6URK8 271 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 TOGARAM2Q6ZUX3 1019 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 KIAA0319LQ8IZA0 1049 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 AGBL5Q8NDL9 886 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 ERCC4Q92889 916 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 FATE1Q969F0 183 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 GJA10Q969M2 543 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 ELAC2Q9BQ52 826 aaKnown RBP6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 MBNL3Q9NUK0 354 aaKnown RBP6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 KLHL11Q9NVR0 708 aa6.92□□□□□ -1.3
HMGB1P47-201ENST00000511281 CREB3O43889 395 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 OPHN1O60890 802 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 IGHA1P01876 353 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 MPOP05164 745 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 CELA3BP08861 270 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 EDNRBP24530 442 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 TRHRP34981 398 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 IL12RB1P42701 662 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 RGS3P49796 1198 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 TMEM62Q0P6H9 643 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 STILQ15468 1287 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 ADRM1Q16186 407 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 CR1LQ2VPA4 569 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 PGS1Q32NB8 556 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 AMIGO3Q86WK7 504 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 DENND1CQ8IV53 801 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 CDYL2Q8N8U2 506 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 IGDCC4Q8TDY8 1250 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 RPGRQ92834 1020 aaKnown RBP6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 ARPC5LQ9BPX5 153 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 BTBD2Q9BX70 525 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 ACE2Q9BYF1 805 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 RXFP1Q9HBX9 757 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 UCKL1Q9NWZ5 548 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 GALNT8Q9NY28 637 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 TAGLN3Q9UI15 199 aa6.91□□□□□ -1.3
HMGB1P47-201ENST00000511281 HRKO00198 91 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PMM2O15305 246 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 HTRA2O43464 458 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 B3GALT2O43825 422 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 SEC24DO94855 1032 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 ENO2P09104 434 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 SLC5A1P13866 664 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 TM4SF4P48230 202 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 AGFG1P52594 562 aaKnown RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 YBX1P67809 324 aaKnown RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 FAM193AP78312 1265 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRR5P85299 388 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 DHX8Q14562 1220 aaKnown RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 UAP1L1Q3KQV9 507 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 ETV3LQ6ZN32 361 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 MARCH10Q8NA82 808 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 CPA5Q8WXQ8 436 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PAWRQ96IZ0 340 aaKnown RBP6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 MTG2Q9H4K7 406 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 KLHL14Q9P2G3 628 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PHTF1Q9UMS5 762 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 PCDHB6Q9Y5E3 794 aa6.9□□□□□ -1.3
HMGB1P47-201ENST00000511281 CUTAO60888 179 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 APOL3O95236 402 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 APEX1P27695 318 aaKnown RBP6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 ECE1P42892 770 aa6.89□□□□□ -1.31
HMGB1P47-201ENST00000511281 MCAMP43121 646 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms