RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ARID2Q68CP9 1835 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 A0A087WZ62 844 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 ATP2C1P98194 919 aaPredicted RBP15.59■□□□□ 0.09
DDX41-212ENST00000511040 TAP1Q03518 808 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 ECM1Q16610 540 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 DTHD1Q6ZMT9 781 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 BRAPQ7Z569 592 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 TOP1MTQ969P6 601 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 YME1L1Q96TA2 773 aa15.59■□□□□ 0.09
DDX41-212ENST00000511040 FDXACB1Q9BRP7 624 aaPredicted RBP15.59■□□□□ 0.09
DDX41-212ENST00000511040 POLR3CQ9BUI4 534 aaPredicted RBP15.59■□□□□ 0.09
DDX41-212ENST00000511040 RFXAPO00287 272 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 LAD1O00515 517 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 GPR182O15218 404 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 HSP90AA1P07900 732 aaKnown RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 DARSP14868 501 aaKnown RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 RPA1P27694 616 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 CDC25AP30304 524 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 PRPHP41219 470 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 RARRES1P49788 294 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 RESTQ13127 1097 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 FAM173BQ6P4H8 233 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 MAEAQ7L5Y9 396 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 SNX29Q8TEQ0 813 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 PRPF31Q8WWY3 499 aaKnown RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 ARNTL2Q8WYA1 636 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 MTRQ99707 1265 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 ADAM2Q99965 735 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 FTHL17Q9BXU8 183 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 GCOM2Q9BZD3 368 aaPredicted RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
DDX41-212ENST00000511040 XPNPEP1Q9NQW7 623 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 MTUS1Q9ULD2 1270 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 MTMR6Q9Y217 621 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 PPME1Q9Y570 386 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 COL4A3BPQ9Y5P4 624 aa15.58■□□□□ 0.08
DDX41-212ENST00000511040 DENND3A2RUS2 1198 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 EPOPA6NHQ4 379 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 USO1O60763 962 aaKnown RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 HTRA4P83105 476 aaPredicted RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 LAMTOR4Q0VGL1 99 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 PDIA5Q14554 519 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 ZRSR1Q15695 479 aaKnown RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 ODR4Q5SWX8 454 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 HAUS3Q68CZ6 603 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 IGSF22Q8N9C0 903 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
DDX41-212ENST00000511040 NACC1Q96RE7 527 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 ATP6V0A4Q9HBG4 840 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 STXBP5LQ9Y2K9 1186 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 INSL6Q9Y581 213 aa15.57■□□□□ 0.08
DDX41-212ENST00000511040 CHD9Q3L8U1 2897 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 LINC01553A4QN01 128 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 STX6O43752 255 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX41-212ENST00000511040 FOSL2P15408 326 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 GATMP50440 423 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 SF3A1Q15459 793 aaKnown RBP15.56■□□□□ 0.08
DDX41-212ENST00000511040 EXOC8Q8IYI6 725 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 ZNF710Q8N1W2 664 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 ASAP3Q8TDY4 903 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 TCP11Q8WWU5 503 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 GPRC5CQ9NQ84 441 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 DDX19AQ9NUU7 478 aaKnown RBP15.56■□□□□ 0.08
DDX41-212ENST00000511040 KIAA1024Q9UPX6 916 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 TTC3P53804 2025 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 MYO9BQ13459 2157 aa15.56■□□□□ 0.08
DDX41-212ENST00000511040 DGAT1O75907 488 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 CDC42EP1Q00587 391 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 CEBPZQ03701 1054 aaKnown RBP15.55■□□□□ 0.08
DDX41-212ENST00000511040 ADGRE1Q14246 886 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 DSC3Q14574 896 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 KRT79Q5XKE5 535 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 PADI6Q6TGC4 694 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 ZNF410Q86VK4 478 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 RNF149Q8NC42 400 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 PLIN2Q99541 437 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 MMTAG2Q9BU76 263 aaKnown RBP15.55■□□□□ 0.08
DDX41-212ENST00000511040 POLR3FQ9H1D9 316 aaPredicted RBP15.55■□□□□ 0.08
DDX41-212ENST00000511040 IFT122Q9HBG6 1241 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 RGS18Q9NS28 235 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 DBR1Q9UK59 544 aaKnown RBP15.55■□□□□ 0.08
DDX41-212ENST00000511040 LRFN2Q9ULH4 789 aa15.55■□□□□ 0.08
DDX41-212ENST00000511040 C9IYK1 514 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 GAS2O43903 313 aaKnown RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 IGFBP4P22692 258 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 ARL2P36404 184 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 SARSP49591 514 aaKnown RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 GRIN1Q05586 938 aa15.54■□□□□ 0.08
DDX41-212ENST00000511040 PAN2Q504Q3 1202 aaKnown RBP15.54■□□□□ 0.08
DDX41-212ENST00000511040 SLC24A5Q71RS6 500 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms