RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 KCNG1Q9UIX4 513 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 HOOK1Q9UJC3 728 aaKnown RBP16.45■□□□□ 0.22
RNF4-213ENST00000509388 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
RNF4-213ENST00000509388 HIP1RO75146 1068 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 FAM13AO94988 1023 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 VTNP04004 478 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 CKBP12277 381 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 LIG1P18858 919 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 MCM4P33991 863 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 DRP2Q13474 957 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 TFDP1Q14186 410 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 KRBA2Q6ZNG9 492 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 LINC01465Q8N7H1 131 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 PRPF31Q8WWY3 499 aaKnown RBP16.44■□□□□ 0.22
RNF4-213ENST00000509388 NLRP7Q8WX94 980 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
RNF4-213ENST00000509388 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 KBTBD4Q9NVX7 518 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 TBX21Q9UL17 535 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 COL4A3BPQ9Y5P4 624 aa16.44■□□□□ 0.22
RNF4-213ENST00000509388 NPHP3-ACAD11A0A0J9YXS1 232 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 MYMKA6NI61 221 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 RSPH10B2B2RC85 870 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 PITPNM1O00562 1244 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 KIAA0355O15063 1070 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 ACTN4O43707 911 aaKnown RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 NR1I2O75469 434 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 RSPH10BP0C881 870 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 IDEP14735 1019 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 SELPP16109 830 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 ARL2P36404 184 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 MRPS6P82932 125 aaKnown RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 PPP2R5AQ15172 486 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 SH3RF1Q7Z6J0 888 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 ENGASEQ8NFI3 743 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 DDX12PQ92771 950 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 WNT8BQ93098 351 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 NLRP4Q96MN2 994 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
RNF4-213ENST00000509388 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 ODF2LQ9ULJ1 636 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 TRPV2Q9Y5S1 764 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 TCHHQ07283 1943 aa16.43■□□□□ 0.22
RNF4-213ENST00000509388 CCDC169A6NNP5 214 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 TIMP1P01033 207 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 PTMSP20962 102 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 ASIC1P78348 528 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 LAMTOR4Q0VGL1 99 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
RNF4-213ENST00000509388 GIT2Q14161 759 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 TRIM71Q2Q1W2 868 aaKnown RBP16.42■□□□□ 0.22
RNF4-213ENST00000509388 ZNF618Q5T7W0 954 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 LRRC8DQ7L1W4 858 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 MYCT1Q8N699 235 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 TIGD1Q96MW7 591 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 C7orf25Q9BPX7 421 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 REEP2Q9BRK0 252 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 CELF4Q9BZC1 486 aaKnown RBP16.42■□□□□ 0.22
RNF4-213ENST00000509388 GCOM2Q9BZD3 368 aaPredicted RBP16.42■□□□□ 0.22
RNF4-213ENST00000509388 C17orf75Q9HAS0 396 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 LARSQ9P2J5 1176 aaKnown RBP16.42■□□□□ 0.22
RNF4-213ENST00000509388 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
RNF4-213ENST00000509388 TRIM43BA6NCK2 446 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 SFI1A8K8P3 1242 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 MBD3O95983 291 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 MYL1P05976 194 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 GLRA2P23416 452 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 CYP2C18P33260 490 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 GPC3P51654 580 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 SMTNP53814 917 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 CCL23P55773 120 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 RBL2Q08999 1139 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 DMP1Q13316 513 aaPredicted RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 ZNF410Q86VK4 478 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 KSR1Q8IVT5 923 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 GRAMD1CQ8IYS0 662 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 TMEM199Q8N511 208 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 DEPTORQ8TB45 409 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 ASAP3Q8TDY4 903 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 TRIM43Q96BQ3 446 aaPredicted RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 ZNF668Q96K58 619 aaPredicted RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 TRIM9Q9C026 710 aa16.41■□□□□ 0.22
RNF4-213ENST00000509388 INO80BQ9C086 356 aaPredicted RBP16.41■□□□□ 0.22
RNF4-213ENST00000509388 BLZF1Q9H2G9 400 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms