RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 IGKV6-21A0A0C4DH24 114 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 CCDC194A0A1B0GVG4 234 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 EML1O00423 815 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 LINC01565O15544 149 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 SLC37A4O43826 429 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 FGFR1P11362 822 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 CDC42EP1Q00587 391 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 DRP2Q13474 957 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
PDPN-208ENST00000509009 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 ADGRD2Q7Z7M1 963 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 ECHDC2Q86YB7 292 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 OXER1Q8TDS5 423 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 CASD1Q96PB1 797 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 SH2D3AQ9BRG2 576 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 LRFN3Q9BTN0 628 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 KCNMB3Q9NPA1 279 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 RNF19AQ9NV58 838 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 SEPT9Q9UHD8 586 aaPredicted RBP14.06□□□□□ -0.16
PDPN-208ENST00000509009 FAM50BQ9Y247 325 aa14.06□□□□□ -0.16
PDPN-208ENST00000509009 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 GPR37L1O60883 481 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 MAFO75444 373 aaPredicted RBP14.05□□□□□ -0.16
PDPN-208ENST00000509009 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
PDPN-208ENST00000509009 FGF18O76093 207 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
PDPN-208ENST00000509009 XBP1P17861 261 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 FGFR4P22455 802 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 SSTR3P32745 418 aaPredicted RBP14.05□□□□□ -0.16
PDPN-208ENST00000509009 DNM2P50570 870 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 AK2P54819 239 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 PSMC5P62195 406 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 UBE3AQ05086 875 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 ANKRD1Q15327 319 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 LRRC55Q6ZSA7 311 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 ANO5Q75V66 913 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 NEK8Q86SG6 692 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 MICAL1Q8TDZ2 1067 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 HAS1Q92839 578 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
PDPN-208ENST00000509009 PRKAG3Q9UGI9 489 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 PCDHGC5Q9Y5F6 944 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 STK36Q9NRP7 1315 aa14.05□□□□□ -0.16
PDPN-208ENST00000509009 A0A0U1RQF3 1178 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 HOXA2O43364 376 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 MBTPS2O43462 519 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 TBX10O75333 385 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 EOMESO95936 686 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 GCFC2P16383 781 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 QARSP47897 775 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 NRIP1P48552 1158 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 ERVFC1P60507 584 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 ZP2Q05996 745 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 SMAD2Q15796 467 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 CLUL1Q15846 466 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 ME3Q16798 604 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 EARS2Q5JPH6 523 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 TMEM31Q5JXX7 168 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 RBM23Q86U06 439 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 ZNF598Q86UK7 904 aaKnown RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 EFHBQ8N7U6 833 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 NECAB1Q8N987 351 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 NLRP7Q8WX94 980 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 PPP2R3CQ969Q6 453 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 MSLNLQ96KJ4 702 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 SCLT1Q96NL6 688 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 GCOM2Q9BZD3 368 aaPredicted RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 TLE6Q9H808 572 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 C11orf16Q9NQ32 467 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 CLEC1BQ9P126 229 aa14.04□□□□□ -0.16
PDPN-208ENST00000509009 SUCLA2Q9P2R7 463 aaPredicted RBP14.04□□□□□ -0.16
PDPN-208ENST00000509009 A0A087WZ62 844 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 TBX3O15119 743 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
PDPN-208ENST00000509009 P4HBP07237 508 aaKnown RBP14.03□□□□□ -0.16
PDPN-208ENST00000509009 LAG3P18627 525 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 NPEPPSP55786 919 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 EPHA7Q15375 998 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 CSPP1Q1MSJ5 1256 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 ADHFE1Q8IWW8 467 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
PDPN-208ENST00000509009 WASF1Q92558 559 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 FDXACB1Q9BRP7 624 aaPredicted RBP14.03□□□□□ -0.16
PDPN-208ENST00000509009 CHST12Q9NRB3 414 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 CD207Q9UJ71 328 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 WDR81Q562E7 1941 aa14.03□□□□□ -0.16
PDPN-208ENST00000509009 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 FSCN2O14926 492 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 PER2O15055 1255 aa14.02□□□□□ -0.17
PDPN-208ENST00000509009 LARGE1O95461 756 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms