RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PRAMEF22A3QJZ6 481 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 SCDO00767 359 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 FOXP2O15409 715 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 FAM20BO75063 409 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 STK10O94804 968 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 KCNA6P17658 529 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 CANXP27824 592 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 PTGS2P35354 604 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 ADAM8P78325 824 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 SERINC3Q13530 473 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 CNGB1Q14028 1251 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 RASA3Q14644 834 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 CATSPEREQ5SY80 951 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 NBPF6Q5VWK0 638 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 EP400NLQ6ZTU2 488 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 OVCH1Q7RTY7 1134 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 RTN4RL1Q86UN2 441 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 SLC7A14Q8TBB6 771 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 FOXRED1Q96CU9 486 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 SCLYQ96I15 445 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 NBPF4Q96M43 638 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 BBC3Q96PG8 261 aaPredicted RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 MLST8Q9BVC4 326 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 RIOX1Q9H6W3 641 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 ADARB2Q9NS39 739 aaKnown RBP3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 ZNHIT2Q9UHR6 403 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 COQ6Q9Y2Z9 468 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 VWA7Q9Y334 891 aa3.55□□□□□ -1.84
DEPDC1B-204ENST00000509006 LOC105371045A0A1W2PR82 267 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 A0A1W2PRX2 142 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 KCNQ2O43526 872 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 IGSF3O75054 1194 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 RASGRP1O95267 797 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 ZNF37AP17032 561 aaPredicted RBP3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 ADCY7P51828 1080 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 ACAP1Q15027 740 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 COLEC12Q5KU26 742 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 ABHD17CQ6PCB6 329 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 GAREM2Q75VX8 874 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 ANKRD35Q8N283 1001 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 JMYQ8N9B5 988 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 RABGGTAQ92696 567 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 HAS1Q92839 578 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 IPO9Q96P70 1041 aaKnown RBP3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 MPHOSPH9Q99550 1183 aa3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 POLR2AP24928 1970 aaKnown RBP3.54□□□□□ -1.84
DEPDC1B-204ENST00000509006 KDM2BQ8NHM5 1336 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 EFCAB14O75071 495 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 RHOBTB3O94955 611 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 ERBB2P04626 1255 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 ZBTB48P10074 688 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 APEX1P27695 318 aaKnown RBP3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 MAN2A2P49641 1150 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 ALDH6A1Q02252 535 aaKnown RBP3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 ADAM15Q13444 863 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 ZC3H12BQ5HYM0 836 aaKnown RBP3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 HIPK4Q8NE63 616 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 CALML6Q8TD86 181 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 SLC25A43Q8WUT9 341 aaPredicted RBP3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 LPPQ93052 612 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 MIEF2Q96C03 454 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 SIRPGQ9P1W8 387 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 NDOR1Q9UHB4 597 aa3.53□□□□□ -1.84
DEPDC1B-204ENST00000509006 TCRBV16S1A1N1A0A5B0 115 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 SLC12A8A0AV02 714 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 GRID2IPA4D2P6 1211 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 C2orf78A6NCI8 922 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 CCDC85CA6NKD9 419 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 TRAF5O00463 557 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 MECP2P51608 486 aaKnown RBP3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 SYCE2Q6PIF2 218 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 ZNF662Q6ZS27 426 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 RHOUQ7L0Q8 258 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 BHLHA9Q7RTU4 235 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 ADGRG3Q86Y34 549 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 WDR48Q8TAF3 677 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 NKD2Q969F2 451 aaPredicted RBP3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 GPHA2Q96T91 129 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 FOXB1Q99853 325 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 GPR87Q9BY21 358 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 SLC6A15Q9H2J7 730 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 PACSIN3Q9UKS6 424 aa3.52□□□□□ -1.85
DEPDC1B-204ENST00000509006 FAM221BA6H8Z2 402 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 ZAR1LA6NP61 321 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 PRLP01236 227 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 ANTXR2P58335 489 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 ATP2C1P98194 919 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 IRF9Q00978 393 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 MAP3K12Q12852 859 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 TMEM132BQ14DG7 1078 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 ELAVL1Q15717 326 aaKnown RBP3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 TMEM177Q53S58 311 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 NAALADL2Q58DX5 795 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 CC2D1AQ6P1N0 951 aaPredicted RBP3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 KLHDC10Q6PID8 442 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 LRP10Q7Z4F1 713 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 BRAPQ7Z569 592 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 FGD2Q7Z6J4 655 aa3.51□□□□□ -1.85
DEPDC1B-204ENST00000509006 ZNF276Q8N554 614 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms