RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ZBTB39O15060 712 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 RPS6KA5O75582 802 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CTSHP09668 335 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 ZSCAN22P10073 491 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 GHRP10912 638 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CYP11B2P19099 503 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 DNAJB2P25686 324 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 ARL2P36404 184 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 NASPP49321 788 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CLCN3P51790 818 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 KCNN1Q92952 543 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 ZNF396Q96N95 335 aaPredicted RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 MMTAG2Q9BU76 263 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 OSBPL7Q9BZF2 842 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 ELAC1Q9H777 363 aaKnown RBP11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 C17orf75Q9HAS0 396 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 RGS18Q9NS28 235 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
POLR2J3-213ENST00000508848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 PPP6R2O75170 966 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 YEATS4O95619 227 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 EYA4O95677 639 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 VTNP04004 478 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 SCP2P22307 547 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 PAK2Q13177 524 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 DSC3Q14574 896 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 EMC2Q15006 297 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 KIZQ2M2Z5 673 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 PLA2G4FQ68DD2 849 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 SLC24A5Q71RS6 500 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 RTN4RL1Q86UN2 441 aaPredicted RBP11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 FERMT3Q86UX7 667 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 PIGOQ8TEQ8 1089 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 TMEM40Q8WWA1 233 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 MTRQ99707 1265 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 PBX4Q9BYU1 374 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 ATP6V0A4Q9HBG4 840 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 XPNPEP1Q9NQW7 623 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 NOC2LQ9Y3T9 749 aaKnown RBP11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 TCHHQ07283 1943 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 MYH11P35749 1972 aa11.79□□□□□ -0.52
POLR2J3-213ENST00000508848 ARHGEF35A5YM69 484 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 TMEM150BA6NC51 233 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 C9IYK1 514 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 ZNF623O75123 536 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 EOMESO95936 686 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SKIP12755 728 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 POU3F3P20264 500 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 AXLP30530 894 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 CD52P31358 61 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 UBA7P41226 1012 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 PTENP60484 403 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 DRP2Q13474 957 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 TFDP1Q14186 410 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 FAM228AQ86W67 206 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 NPAS4Q8IUM7 802 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 KIFAP3Q92845 792 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 ZNF689Q96CS4 500 aaPredicted RBP11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SAMD11Q96NU1 681 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 NTPCRQ9BSD7 190 aaKnown RBP11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 SLC28A3Q9HAS3 691 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 MTMR10Q9NXD2 777 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 DACT1Q9NYF0 836 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 KIAA1024Q9UPX6 916 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
POLR2J3-213ENST00000508848 A0A087WZ62 844 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 A0A0U1RQF3 1178 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 CARNS1A5YM72 827 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 VWA3AA6NCI4 1184 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 BRD1O95696 1058 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 F13A1P00488 732 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 GUCY2CP25092 1073 aa11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-213ENST00000508848 DEFB103AP81534 67 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms