RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SMC1BQ8NDV3 1235 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 NKD2Q969F2 451 aaPredicted RBP7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 CDK5RAP1Q96SZ6 601 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 C12orf65Q9H3J6 166 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 IFT57Q9NWB7 429 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 SAE1Q9UBE0 346 aaPredicted RBP7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 GSG1L2A8MUP6 293 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 MATN3O15232 486 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 TGM5O43548 720 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 PLEKHG4Q58EX7 1191 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 KLHDC10Q6PID8 442 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 GPR135Q8IZ08 494 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 C7orf31Q8N865 590 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 OR14A2Q96R54 314 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 DENND2AQ9ULE3 1009 aa7.67□□□□□ -1.18
TOPBP1-206ENST00000508524 A0A087X0B3 334 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 MUSKO15146 869 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 SLC26A4O43511 780 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 SMAD3P84022 425 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 BMP8AQ7Z5Y6 402 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 PHYKPLQ8IUZ5 450 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 ZZZ3Q8IYH5 903 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 MYL10Q9BUA6 226 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 PITHD1Q9GZP4 211 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 SEMA4AQ9H3S1 761 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
TOPBP1-206ENST00000508524 PMS2P1A4D2B8 440 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 PRPF6O94906 941 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 COMTP21964 271 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 RPS19P39019 145 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 BCAR1P56945 870 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 LRRC32Q14392 662 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 UNQ6494/PRO21346Q6UXR6 183 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 Q6ZSN1 163 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 POLNQ7Z5Q5 900 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 SPRED1Q7Z699 444 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 AHI1Q8N157 1196 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 SH3RF3Q8TEJ3 882 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 RPGRQ92834 1020 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 AGO3Q9H9G7 860 aaKnown RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 POLR3BQ9NW08 1133 aaPredicted RBP7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 TESMINQ9Y4I5 508 aa7.65□□□□□ -1.18
TOPBP1-206ENST00000508524 C2orf78A6NCI8 922 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 KPNA1P52294 538 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 SESN2P58004 480 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 ADCY2Q08462 1091 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 SAFB2Q14151 953 aaKnown RBP eCLIP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 HS1BP3Q53T59 392 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 KIAA1841Q6NSI8 718 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 SHCBP1Q8NEM2 672 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 EDAQ92838 391 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 LPPQ93052 612 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 GFM2Q969S9 779 aaKnown RBP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 DYDC2Q96IM9 177 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 GPR101Q96P66 508 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 MTG2Q9H4K7 406 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 SPTLC3Q9NUV7 552 aa7.64□□□□□ -1.19
TOPBP1-206ENST00000508524 A0A0A6YYJ9 748 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 PDE8AO60658 829 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 H2AFYO75367 372 aaKnown RBP7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 CD40P25942 277 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 STAT3P40763 770 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ADCYAP1R1P41586 468 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 SCNN1BP51168 640 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ADCY7P51828 1080 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ADAM8P78325 824 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 FOXL1Q12952 345 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 RIN1Q13671 783 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ACAP1Q15027 740 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 SPDYAQ5MJ70 313 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 GPR158Q5T848 1215 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 TIGD7Q6NT04 549 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 GIMAP6Q6P9H5 292 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 SLC7A6OSQ96CW6 309 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ADOQ96SZ5 270 aa7.63□□□□□ -1.19
TOPBP1-206ENST00000508524 ELL2O00472 640 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 APOL3O95236 402 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 MYCLP1P12525 358 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 ACO1P21399 889 aaKnown RBP7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 LSSP48449 732 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 PHC1P78364 1004 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 ATP2C1P98194 919 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 MAMDC4Q6UXC1 1216 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 CLEC14AQ86T13 490 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 PASD1Q8IV76 773 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 OR2W6PQ8NHA6 318 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 RABGGTAQ92696 567 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 WDR92Q96MX6 357 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 SLC6A15Q9H2J7 730 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 NELFAQ9H3P2 528 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 PLA2G3Q9NZ20 509 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 DNAI1Q9UI46 699 aa7.62□□□□□ -1.19
TOPBP1-206ENST00000508524 TLDC2A0PJX2 215 aa7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 OPHN1O60890 802 aa7.61□□□□□ -1.19
TOPBP1-206ENST00000508524 MSX2P35548 267 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms