RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 H3BQ06 376 aaPredicted RBP18.25■□□□□ 0.51
LMNA-222ENST00000508500 CSPG5O95196 566 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 FGFR4P22455 802 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 IRS1P35568 1242 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 DLX2Q07687 328 aaPredicted RBP18.25■□□□□ 0.51
LMNA-222ENST00000508500 MTERF2Q49AM1 385 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 XKR3Q5GH77 459 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 TMEM31Q5JXX7 168 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 PPP4R3AQ6IN85 833 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 PIK3AP1Q6ZUJ8 805 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 ANO5Q75V66 913 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 TNFRSF25Q93038 417 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 FAM122AQ96E09 287 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 WRAP73Q9P2S5 460 aaPredicted RBP18.25■□□□□ 0.51
LMNA-222ENST00000508500 ORC3Q9UBD5 711 aaPredicted RBP18.25■□□□□ 0.51
LMNA-222ENST00000508500 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
LMNA-222ENST00000508500 LRFN2Q9ULH4 789 aa18.25■□□□□ 0.51
LMNA-222ENST00000508500 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 GRXCR2A6NFK2 248 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 CSDE1O75534 798 aaKnown RBP18.24■□□□□ 0.51
LMNA-222ENST00000508500 FGFR1P11362 822 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
LMNA-222ENST00000508500 TMOD1P28289 359 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 NR5A1Q13285 461 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 PPP2R5CQ13362 524 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 CTC1Q2NKJ3 1217 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 ODR4Q5SWX8 454 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 FAM43BQ6ZT52 329 aaPredicted RBP18.24■□□□□ 0.51
LMNA-222ENST00000508500 NSUN7Q8NE18 718 aaKnown RBP18.24■□□□□ 0.51
LMNA-222ENST00000508500 GTF3C6Q969F1 213 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 MAP7D2Q96T17 732 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 TRIOO75962 3097 aa18.24■□□□□ 0.51
LMNA-222ENST00000508500 TBKBP1A7MCY6 615 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 LINC01565O15544 149 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 JAK2O60674 1132 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 DARSP14868 501 aaKnown RBP18.23■□□□□ 0.51
LMNA-222ENST00000508500 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 NAALADL2Q58DX5 795 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 PTCRAQ6ISU1 281 aaPredicted RBP18.23■□□□□ 0.51
LMNA-222ENST00000508500 LRRC55Q6ZSA7 311 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 ADGRD2Q7Z7M1 963 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 ZNF579Q8NAF0 562 aaKnown RBP18.23■□□□□ 0.51
LMNA-222ENST00000508500 POF1BQ8WVV4 589 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 CWH43Q9H720 699 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 ELAC1Q9H777 363 aaKnown RBP18.23■□□□□ 0.51
LMNA-222ENST00000508500 TMEM161AQ9NX61 479 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 CLDND1Q9NY35 253 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
LMNA-222ENST00000508500 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 WNT7AO00755 349 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
LMNA-222ENST00000508500 MAFO75444 373 aaPredicted RBP18.22■□□□□ 0.51
LMNA-222ENST00000508500 NEK4P51957 841 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 PSMC5P62195 406 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 SPIRE1Q08AE8 756 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 PLA2G4FQ68DD2 849 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 FAM20AQ96MK3 541 aa18.22■□□□□ 0.51
LMNA-222ENST00000508500 TYW1Q9NV66 732 aaKnown RBP18.22■□□□□ 0.51
LMNA-222ENST00000508500 FAM86C2PA6NEL3 165 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 GCFC2P16383 781 aaKnown RBP18.21■□□□□ 0.51
LMNA-222ENST00000508500 XBP1P17861 261 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 NPEPPSP55786 919 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 EP400NLQ6ZTU2 488 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 KSR1Q8IVT5 923 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 GJD3Q8N144 294 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 CASD1Q96PB1 797 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 ATP6V0A4Q9HBG4 840 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 MUC6Q6W4X9 2439 aa18.21■□□□□ 0.51
LMNA-222ENST00000508500 A0A087WZ62 844 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 TBX3O15119 743 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 TBX10O75333 385 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 ATF7P17544 494 aaPredicted RBP18.2■□□□□ 0.5
LMNA-222ENST00000508500 ADAM15Q13444 863 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
LMNA-222ENST00000508500 ECHDC2Q86YB7 292 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 ZNF710Q8N1W2 664 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 COLGALT1Q8NBJ5 622 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 NLRP7Q8WX94 980 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 FDXACB1Q9BRP7 624 aaPredicted RBP18.2■□□□□ 0.5
LMNA-222ENST00000508500 IGFLR1Q9H665 355 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 RGL1Q9NZL6 768 aa18.2■□□□□ 0.5
LMNA-222ENST00000508500 ZNF318Q5VUA4 2279 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 C19orf67A6NJJ6 358 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 BTBD18B2RXH4 712 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 ZBTB39O15060 712 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 KRT2P35908 639 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 QARSP47897 775 aaKnown RBP18.19■□□□□ 0.5
LMNA-222ENST00000508500 ERVFC1P60507 584 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 EPHA7Q15375 998 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 CLLU1OSQ5K130 101 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 WASF1Q92558 559 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 TMEM117Q9H0C3 514 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 CYP26B1Q9NR63 512 aa18.19■□□□□ 0.5
LMNA-222ENST00000508500 SUCLA2Q9P2R7 463 aaPredicted RBP18.19■□□□□ 0.5
LMNA-222ENST00000508500 A0A0U1RQF3 1178 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 FGF18O76093 207 aa18.18■□□□□ 0.5
LMNA-222ENST00000508500 P4HBP07237 508 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms