RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 POF1BQ8WVV4 589 aa14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 ZNF668Q96K58 619 aaPredicted RBP14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 ELAC1Q9H777 363 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 C11orf16Q9NQ32 467 aa14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 RNF19AQ9NV58 838 aa14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 DDX25Q9UHL0 483 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 TPCN1Q9ULQ1 816 aa14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 TRIOO75962 3097 aa14.65□□□□□ -0.06
HMGCS1-205ENST00000508319 DTNBO60941 627 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 DARSP14868 501 aaKnown RBP14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 ANAPC15P60006 121 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 ZP2Q05996 745 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 XKR3Q5GH77 459 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 ZNF710Q8N1W2 664 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 NIFKQ9BYG3 293 aaKnown RBP14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 KCNMB3Q9NPA1 279 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 GJB4Q9NTQ9 266 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 SEPT9Q9UHD8 586 aaPredicted RBP14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 VAV3Q9UKW4 847 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 PCDHGC5Q9Y5F6 944 aa14.64□□□□□ -0.07
HMGCS1-205ENST00000508319 IGKV6-21A0A0C4DH24 114 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 PI4K2BG5E9Z4 385 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 CTDNEP1O95476 244 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 SSTR3P32745 418 aaPredicted RBP14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 ADAM15Q13444 863 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 SMAD2Q15796 467 aaKnown RBP14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 CLUL1Q15846 466 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 LETM2Q2VYF4 491 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 MTERF2Q49AM1 385 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 COLGALT1Q8NBJ5 622 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 OXER1Q8TDS5 423 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 SH2D3AQ9BRG2 576 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 LRFN3Q9BTN0 628 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 CWH43Q9H720 699 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 ATP6V0A4Q9HBG4 840 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 TYW1Q9NV66 732 aaKnown RBP14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 PCDHB12Q9Y5F1 795 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 ARID2Q68CP9 1835 aa14.63□□□□□ -0.07
HMGCS1-205ENST00000508319 CCDC194A0A1B0GVG4 234 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 EML1O00423 815 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 GLP2RO95838 553 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 FGFR4P22455 802 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 UBE3AQ05086 875 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 PPP2R5CQ13362 524 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 PPP4R3AQ6IN85 833 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 EFHBQ8N7U6 833 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 NLRP7Q8WX94 980 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 PPP2R3CQ969Q6 453 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 CASD1Q96PB1 797 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 TMEM117Q9H0C3 514 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 IGFLR1Q9H665 355 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 PPP4R2Q9NY27 417 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 PRKAG3Q9UGI9 489 aa14.62□□□□□ -0.07
HMGCS1-205ENST00000508319 FAM86C2PA6NEL3 165 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 HOXA2O43364 376 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 MBTPS2O43462 519 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 CSDE1O75534 798 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 FGF18O76093 207 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 LARGE1O95461 756 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 GCFC2P16383 781 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ZSCAN20P17040 1043 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ATF7P17544 494 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 XBP1P17861 261 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 LAG3P18627 525 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 NRIP1P48552 1158 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 NDUFV1P49821 464 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 AK2P54819 239 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 PSMC5P62195 406 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 SMAD4Q13485 552 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 EARS2Q5JPH6 523 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 TMEM31Q5JXX7 168 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 CLLU1OSQ5K130 101 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 SPOUT1Q5T280 376 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 LRRC55Q6ZSA7 311 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 PIK3AP1Q6ZUJ8 805 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ANO5Q75V66 913 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ZNF598Q86UK7 904 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ECHDC2Q86YB7 292 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ADHFE1Q8IWW8 467 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 THNSL1Q8IYQ7 743 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 LRRC43Q8N309 656 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 MSLNLQ96KJ4 702 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 TLR9Q9NR96 1032 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 AAASQ9NRG9 546 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 CLEC1BQ9P126 229 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 CD207Q9UJ71 328 aa14.61□□□□□ -0.07
HMGCS1-205ENST00000508319 A0A0U1RQF3 1178 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 FAM205CA6NFA0 338 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 GPR37L1O60883 481 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 MAFO75444 373 aaPredicted RBP14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 EYA4O95677 639 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 FDPSP14324 419 aaKnown RBP14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 ANKRD1Q15327 319 aa14.6□□□□□ -0.07
HMGCS1-205ENST00000508319 CSPP1Q1MSJ5 1256 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms