RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
UBE2D3-223ENST00000508249 AAASQ9NRG9 546 aa10.46□□□□□ -0.73
UBE2D3-223ENST00000508249 LZTS1Q9Y250 596 aa10.46□□□□□ -0.73
UBE2D3-223ENST00000508249 NR2E1Q9Y466 385 aa10.46□□□□□ -0.73
UBE2D3-223ENST00000508249 KDM3AQ9Y4C1 1321 aa10.46□□□□□ -0.73
UBE2D3-223ENST00000508249 CACNA1IQ9P0X4 2223 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 STK36Q9NRP7 1315 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 SMCO2A6NFE2 343 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 C9IYK1 514 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 PFKFB2O60825 505 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 PBX3P40426 434 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TMEM62Q0P6H9 643 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 PDE12Q6L8Q7 609 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 DTWD2Q8NBA8 298 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 MRPS27Q92552 414 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 GPRASP2Q96D09 838 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TCF25Q9BQ70 676 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 SLC26A6Q9BXS9 759 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 ZMYND12Q9H0C1 365 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 FAM49AQ9H0Q0 323 aaPredicted RBP10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 ERVK-5Q9HDB9 667 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TYW1Q9NV66 732 aaKnown RBP10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TMEM260Q9NX78 707 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 RTEL1Q9NZ71 1219 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TRPV2Q9Y5S1 764 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 R4GN57 208 aa10.45□□□□□ -0.74
UBE2D3-223ENST00000508249 TBKBP1A7MCY6 615 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 LMNAP02545 664 aaKnown RBP10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 STAG3L1P0CL83 205 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 FGFR1P11362 822 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 NEK4P51957 841 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 AK2P54819 239 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 CCT2P78371 535 aaKnown RBP10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 PAK2Q13177 524 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 PUM1Q14671 1186 aaKnown RBP eCLIP10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 RABEP1Q15276 862 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 KIAA1841Q6NSI8 718 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 USP17L6PQ6QN14 398 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 FLCNQ8NFG4 579 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 MICAL1Q8TDZ2 1067 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 TRAPPC12Q8WVT3 735 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 PCDHA6Q9UN73 950 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 PCDHB12Q9Y5F1 795 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 PCDHA8Q9Y5H6 950 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 CACNA1GO43497 2377 aa10.44□□□□□ -0.74
UBE2D3-223ENST00000508249 hCG_1642624A0A1W2PR95 340 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 C2orf71A6NGG8 1288 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 CLASP2O75122 1294 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 SEC24BO95487 1268 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 INSRRP14616 1297 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 CLK2P49760 499 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 ITIH3Q06033 890 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 RSPH3Q86UC2 560 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 THNSL1Q8IYQ7 743 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 REXO1Q8N1G1 1221 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 DCLK2Q8N568 766 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 C12orf76Q8N812 135 aaPredicted RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 CASP10Q92851 521 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 PHKBQ93100 1093 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 NECTIN4Q96NY8 510 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 ANO3Q9BYT9 981 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 CDHR5Q9HBB8 845 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 RGS18Q9NS28 235 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 ERAP1Q9NZ08 941 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 DLGAP2Q9P1A6 1054 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 DUSP12Q9UNI6 340 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
UBE2D3-223ENST00000508249 KRBA1A5PL33 1030 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 N4BP1O75113 896 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 EOMESO95936 686 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 SRGAP2BP0DMP2 458 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 ITGB5P18084 799 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 SREBF1P36956 1147 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 MCM2P49736 904 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 IGBP1P78318 339 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 SETQ01105 290 aaPredicted RBP10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 SCRN1Q12765 414 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 DSC3Q14574 896 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 UBE2SQ16763 222 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 NIPA1Q7RTP0 329 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 SUMF1Q8NBK3 374 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 CASD1Q96PB1 797 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 CELF4Q9BZC1 486 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 MFSD1Q9H3U5 465 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 ENTPD7Q9NQZ7 604 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 TPCN1Q9ULQ1 816 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 USTQ9Y2C2 406 aa10.42□□□□□ -0.74
UBE2D3-223ENST00000508249 NOC2LQ9Y3T9 749 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms