RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SFR1Q86XK3 245 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 RELL1Q8IUW5 271 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 AGGF1Q8N302 714 aaeCLIP11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 FAM133AQ8N9E0 248 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 NKX2-3Q8TAU0 364 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 HCAR2Q8TDS4 363 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 LPIN2Q92539 896 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 CCDC127Q96BQ5 260 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 COX4I2Q96KJ9 171 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 ECT2Q9H8V3 914 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 NDFIP2Q9NV92 336 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 CAPN6Q9Y6Q1 641 aa11.62□□□□□ -0.55
PDLIM5-210ENST00000508216 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 CDC42BPBQ9Y5S2 1711 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 PVALEFA0A1B0GWK0 134 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 FADS2P1A8MWK0 482 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 HGSO14964 777 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 ALOX15BO15296 676 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 ATP9AO75110 1047 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 KRT6AP02538 564 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 KRT6BP04259 564 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 PRLRP16471 622 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 ZNF12P17014 697 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 OSBPP22059 807 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 TBXAS1P24557 533 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 GTF2H1P32780 548 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 KRT6CP48668 564 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 VAV2P52735 878 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 DNAJC3Q13217 504 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 LRRC8BQ6P9F7 803 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 FASTKD5Q7L8L6 764 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 KRT28Q7Z3Y7 464 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 BRSK1Q8TDC3 778 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 SGF29Q96ES7 293 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 MMS19Q96T76 1030 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 SERHL2Q9H4I8 314 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 NMRK1Q9NWW6 199 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 TRIM10Q9UDY6 481 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 PLAAQ9Y263 795 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 DNAJC16Q9Y2G8 782 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 NEDD4P46934 1319 aa11.61□□□□□ -0.55
PDLIM5-210ENST00000508216 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 CNOT3O75175 753 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 LGR5O75473 907 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 SERPINC1P01008 464 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 GLULP15104 373 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 GALK1P51570 392 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 RTP1P59025 263 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 RESTQ13127 1097 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 SPDYAQ5MJ70 313 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ZCCHC8Q6NZY4 707 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 PDXDC1Q6P996 788 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 AGMOQ6ZNB7 445 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ANO5Q75V66 913 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ASXL2Q76L83 1435 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 HACE1Q8IYU2 909 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 CPSF7Q8N684 471 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ZNF454Q8N9F8 522 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 FNBP1Q96RU3 617 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 DHRS9Q9BPW9 319 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 HERC2P3Q9BVR0 1158 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 VPS16Q9H269 839 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 XAB2Q9HCS7 855 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 LZTFL1Q9NQ48 299 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 CNGB3Q9NQW8 809 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ZMYND8Q9ULU4 1186 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 USP20Q9Y2K6 914 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 ZNF518AQ6AHZ1 1483 aa11.6□□□□□ -0.55
PDLIM5-210ENST00000508216 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 C2orf81A6NN90 581 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ENPP3O14638 875 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 RGS13O14921 159 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SLC22A1O15245 554 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 RNF113AO15541 343 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 AP1G1O43747 822 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ABCB1P08183 1280 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 PABPC1P11940 636 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 ZC3H6P61129 1189 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GBE1Q04446 702 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 GRM2Q14416 872 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 HLTFQ14527 1009 aaKnown RBP eCLIP11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 AKAP4Q5JQC9 854 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 CYP4A22Q5TCH4 519 aa11.59□□□□□ -0.55
PDLIM5-210ENST00000508216 SPATA1Q5VX52 437 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms