RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 TAF2Q6P1X5 1199 aa8.94□□□□□ -0.98
CLDND1-214ENST00000507411 CTR9Q6PD62 1173 aa8.94□□□□□ -0.98
CLDND1-214ENST00000507411 PPFIBP1Q86W92 1011 aa8.94□□□□□ -0.98
CLDND1-214ENST00000507411 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
CLDND1-214ENST00000507411 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
CLDND1-214ENST00000507411 WDR6Q9NNW5 1121 aaKnown RBP8.94□□□□□ -0.98
CLDND1-214ENST00000507411 TSR3Q9UJK0 312 aaKnown RBP8.94□□□□□ -0.98
CLDND1-214ENST00000507411 MRPS17Q9Y2R5 130 aaKnown RBP8.94□□□□□ -0.98
CLDND1-214ENST00000507411 CDY2AQ9Y6F7 541 aa8.94□□□□□ -0.98
CLDND1-214ENST00000507411 SHROOM3Q8TF72 1996 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 CHURC1-FNTBB4DL54 471 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 LILRB3O75022 631 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 LGALS2P05162 132 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 LAMP2P13473 410 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 CSRP1P21291 193 aaKnown RBP8.93□□□□□ -0.98
CLDND1-214ENST00000507411 FNTBP49356 437 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 CCR3P51677 355 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 PFKPQ01813 784 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 KCNC4Q03721 635 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 ADCY1Q08828 1119 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 PAK2Q13177 524 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 MTX1Q13505 466 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
CLDND1-214ENST00000507411 RCSD1Q6JBY9 416 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 TPRG1Q6ZUI0 275 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 WDR63Q8IWG1 891 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
CLDND1-214ENST00000507411 NSUN6Q8TEA1 469 aaKnown RBP8.93□□□□□ -0.98
CLDND1-214ENST00000507411 AUTS2Q8WXX7 1259 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 TATDN2Q93075 761 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 EDEM2Q9BV94 578 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 SMOC1Q9H4F8 434 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 DBNLQ9UJU6 430 aaKnown RBP8.93□□□□□ -0.98
CLDND1-214ENST00000507411 PADI3Q9ULW8 664 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 COL12A1Q99715 3063 aa8.93□□□□□ -0.98
CLDND1-214ENST00000507411 KAT6AQ92794 2004 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 CCDC171Q6TFL3 1326 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 EPN2O95208 641 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 GGPS1O95749 300 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 ADAM17P78536 824 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 MRPS6P82932 125 aaKnown RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 SCAPQ12770 1279 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 GIT2Q14161 759 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 TTF1Q15361 905 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 ZNF444Q8N0Y2 327 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 LOXL4Q96JB6 756 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 IWS1Q96ST2 819 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 MEIS3Q99687 375 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 IER2Q9BTL4 223 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 CCDC86Q9H6F5 360 aaKnown RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 CDHR5Q9HBB8 845 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 TLR7Q9NYK1 1049 aaKnown RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 ARPP21Q9UBL0 812 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 PNMA2Q9UL42 364 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-214ENST00000507411 NOTCH2Q04721 2471 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 SPAG17Q6Q759 2223 aa8.92□□□□□ -0.98
CLDND1-214ENST00000507411 LAMA4Q16363 1823 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 TCRBV5S4A2TA0A5A2 114 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ATXN7O15265 892 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 EIF3JO75822 258 aaKnown RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 FGFR1P11362 822 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 FGD1P98174 961 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ZNF852Q6ZMS4 543 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 LONP2Q86WA8 852 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 SLC39A11Q8N1S5 342 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 CMASQ8NFW8 434 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 DNAJB3Q8WWF6 145 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 RPP25Q9BUL9 199 aaKnown RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ZBP1Q9H171 429 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 MLXIPQ9HAP2 919 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 VPS45Q9NRW7 570 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-214ENST00000507411 RAXQ9Y2V3 346 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 IRAK3Q9Y616 596 aa8.91□□□□□ -0.98
CLDND1-214ENST00000507411 ITPR3Q14573 2671 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 CCDC195A0A1B0GUA6 201 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 DENND3A2RUS2 1198 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 M0QZ92 97 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 SMAPO00193 183 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
CLDND1-214ENST00000507411 RDXP35241 583 aaKnown RBP8.9□□□□□ -0.98
CLDND1-214ENST00000507411 SLC16A2P36021 539 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 MPLP40238 635 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
CLDND1-214ENST00000507411 CXCL12P48061 93 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 FZD5Q13467 585 aa8.9□□□□□ -0.98
CLDND1-214ENST00000507411 WTAPQ15007 396 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms