RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 USP17L5A8MUK1 530 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 ANP32DO95626 131 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 RARAP10276 462 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 PAX7P23759 505 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 TNNI2P48788 182 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 CCNG1P51959 295 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 ITPK1Q13572 414 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 SLC29A2Q14542 456 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 CNGA2Q16280 664 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 CNKSR1Q969H4 720 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 SLC35C1Q96A29 364 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 DHX36Q9H2U1 1008 aaKnown RBP19.21■□□□□ 0.67
NUP54-205ENST00000507257 AZI2Q9H6S1 392 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 MIF4GDA9UHW6 222 aaKnown RBP19.21■□□□□ 0.67
NUP54-205ENST00000507257 CLTAP09496 248 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 RARGP13631 454 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 MYO1EQ12965 1108 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 GRIK3Q13003 919 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 NFIL3Q16649 462 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 FBXO25Q8TCJ0 367 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
NUP54-205ENST00000507257 COA7Q96BR5 231 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 MBOAT7Q96N66 472 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 PRMT1Q99873 361 aaKnown RBP19.21■□□□□ 0.67
NUP54-205ENST00000507257 HOMER3Q9NSC5 361 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 BTG4Q9NY30 223 aa19.21■□□□□ 0.67
NUP54-205ENST00000507257 USP15Q9Y4E8 981 aaPredicted RBP19.21■□□□□ 0.67
NUP54-205ENST00000507257 EVI5O60447 810 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 ALAS1P13196 640 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 VCAM1P19320 739 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 SOX5P35711 763 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 PLTPP55058 493 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 BNIP1Q12981 228 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 MKRN4PQ13434 485 aaPredicted RBP19.2■□□□□ 0.66
NUP54-205ENST00000507257 TBC1D1Q86TI0 1168 aaPredicted RBP19.2■□□□□ 0.66
NUP54-205ENST00000507257 CEP120Q8N960 986 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 AGAP11Q8TF27 550 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 TBC1D31Q96DN5 1066 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 IFT74Q96LB3 600 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 RTFDC1Q9BY42 306 aaPredicted RBP19.2■□□□□ 0.66
NUP54-205ENST00000507257 STK33Q9BYT3 514 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 TRIM31Q9BZY9 425 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 UBA5Q9GZZ9 404 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 GLT8D2Q9H1C3 349 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 GCNT4Q9P109 453 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 AJAP1Q9UKB5 411 aaPredicted RBP19.2■□□□□ 0.66
NUP54-205ENST00000507257 STK24Q9Y6E0 443 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 COL24A1Q17RW2 1714 aa19.2■□□□□ 0.66
NUP54-205ENST00000507257 CYP3A7-CYP3A51PA0A087WV96 503 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 PPP1R12BO60237 982 aaPredicted RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 MARCH6O60337 910 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 AKAP3O75969 853 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 NEBLO76041 1014 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 CYP3A7P24462 503 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 CTNNA2P26232 953 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 HOXD13P35453 343 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 SKIV2L2P42285 1042 aaKnown RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 IFI35P80217 286 aaPredicted RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 PTPROQ16827 1216 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 LRCH2Q5VUJ6 765 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 MOXD1Q6UVY6 613 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 PNMA8AQ86V59 439 aaPredicted RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 TBC1D16Q8TBP0 767 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 ERVK-5Q9HDB9 667 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 OSGEPQ9NPF4 335 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 ABCF3Q9NUQ8 709 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 AGAP1Q9UPQ3 857 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 ATF5Q9Y2D1 282 aaPredicted RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 PCDHA3Q9Y5H8 950 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 SPATA31A1Q5TZJ5 1347 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 POTEB3A0JP26 581 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 POTECB2RU33 542 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 WFS1O76024 890 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 SUN1O94901 812 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 UBOX5O94941 541 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 GJB6O95452 261 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 KRT18P05783 430 aaKnown RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 VIMP08670 466 aaKnown RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 RPSAP08865 295 aaKnown RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 AUHQ13825 339 aaKnown RBP19.19■□□□□ 0.66
NUP54-205ENST00000507257 GIT2Q14161 759 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 C11orf63Q6NUN7 778 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 POTEBQ6S5H4 581 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 MAPKAPK5Q8IW41 473 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 GOPCQ9HD26 462 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 ARHGEF3Q9NR81 526 aa19.19■□□□□ 0.66
NUP54-205ENST00000507257 PFASO15067 1338 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 NPHP3-ACAD11A0A0J9YXS1 232 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 RIPK2O43353 540 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 NR3C1P04150 777 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 PLCG2P16885 1265 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 CASP5P51878 434 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 COPS2P61201 443 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 PPARDQ03181 441 aa19.18■□□□□ 0.66
NUP54-205ENST00000507257 ICA1Q05084 483 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms