RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 TIPINQ9BVW5 301 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 ZHX3Q9H4I2 956 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 SUGCTQ9HAC7 445 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 PANK4Q9NVE7 773 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
RNF4-208ENST00000507247 KIAA0100Q14667 2235 aaKnown RBP15.72■□□□□ 0.11
RNF4-208ENST00000507247 SIP14410 1827 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 BIN1O00499 593 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.11
RNF4-208ENST00000507247 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
RNF4-208ENST00000507247 SMC2O95347 1197 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 CYP2C9P11712 490 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 COL6A1P12109 1028 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 ARL2P36404 184 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 PTPN11Q06124 597 aaPredicted RBP15.71■□□□□ 0.11
RNF4-208ENST00000507247 ZSCAN23Q3MJ62 389 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 ISM2Q6H9L7 571 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 CCDC65Q8IXS2 484 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 EXOC8Q8IYI6 725 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 METTL13Q8N6R0 699 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 ASAP3Q8TDY4 903 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 HPS3Q969F9 1004 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 GSDMAQ96QA5 445 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 JPH2Q9BR39 696 aaPredicted RBP15.71■□□□□ 0.11
RNF4-208ENST00000507247 SENP6Q9GZR1 1112 aaPredicted RBP15.71■□□□□ 0.11
RNF4-208ENST00000507247 PCDHA2Q9Y5H9 948 aa15.71■□□□□ 0.11
RNF4-208ENST00000507247 SYCE3A1L190 88 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 ARVCFO00192 962 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 RHOBTB3O94955 611 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 GNAT1P11488 350 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 GLRA2P23416 452 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 CDK7P50613 346 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 KCNB1Q14721 858 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 IER5Q5VY09 327 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 RETREG2Q8NC44 543 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 KIFAP3Q92845 792 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 WNT8BQ93098 351 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 FIZ1Q96SL8 496 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 FGFBP2Q9BYJ0 223 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 GZF1Q9H116 711 aaPredicted RBP15.7■□□□□ 0.1
RNF4-208ENST00000507247 PARVGQ9HBI0 331 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 TRMT13Q9NUP7 481 aaKnown RBP15.7■□□□□ 0.1
RNF4-208ENST00000507247 EXOC1Q9NV70 894 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 TBC1D7Q9P0N9 293 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 COL4A3BPQ9Y5P4 624 aa15.7■□□□□ 0.1
RNF4-208ENST00000507247 BRCA2P51587 3418 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 SMIM35A0A1B0GVV1 85 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 B4GALT4O60513 344 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 PLS3P13797 630 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 GAP43P17677 238 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 EN2P19622 333 aaPredicted RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 BMP6P22004 513 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 RTP1P59025 263 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 MORC3Q14149 939 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 PTGISQ16647 500 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 HERC4Q5GLZ8 1057 aaPredicted RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 SLC39A5Q6ZMH5 540 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 KSR1Q8IVT5 923 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 KIAA0319LQ8IZA0 1049 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 MYCT1Q8N699 235 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 GLIS3Q8NEA6 775 aa15.69■□□□□ 0.1
RNF4-208ENST00000507247 PRPF31Q8WWY3 499 aaKnown RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 PSPC1Q8WXF1 523 aaKnown RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 PAWRQ96IZ0 340 aaKnown RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 FAM49AQ9H0Q0 323 aaPredicted RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
RNF4-208ENST00000507247 VTNP04004 478 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 CAPN2P17655 700 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
RNF4-208ENST00000507247 PEX3P56589 373 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 LAMTOR4Q0VGL1 99 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 STK4Q13043 487 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 CAPSQ13938 189 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 ODR4Q5SWX8 454 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 SERINC5Q86VE9 423 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 RHPN2Q8IUC4 686 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 SMYD4Q8IYR2 804 aaPredicted RBP15.68■□□□□ 0.1
RNF4-208ENST00000507247 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 DNAJB3Q8WWF6 145 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
RNF4-208ENST00000507247 ZNF668Q96K58 619 aaPredicted RBP15.68■□□□□ 0.1
RNF4-208ENST00000507247 PPP1R16BQ96T49 567 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 FUCA2Q9BTY2 467 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 KIFC3Q9BVG8 833 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 TRPV6Q9H1D0 765 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 C11orf49Q9H6J7 331 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 SEL1LQ9UBV2 794 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 AKT3Q9Y243 479 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 GDAQ9Y2T3 454 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 ALPK3Q96L96 1907 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 ADGRA3Q8IWK6 1321 aa15.68■□□□□ 0.1
RNF4-208ENST00000507247 LETM1O95202 739 aaPredicted RBP15.67■□□□□ 0.1
RNF4-208ENST00000507247 TMOD1P28289 359 aa15.67■□□□□ 0.1
RNF4-208ENST00000507247 NMT1P30419 496 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms