RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 UBE3AQ05086 875 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 TPRNQ4KMQ1 711 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 FAM160B1Q5W0V3 765 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 CES5AQ6NT32 575 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 PDXDC2PQ6P474 469 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 SYCE2Q6PIF2 218 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 CASC1Q6TDU7 716 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 SLC24A5Q71RS6 500 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 METTL13Q8N6R0 699 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 C12orf76Q8N812 135 aaPredicted RBP6.57□□□□□ -1.36
GYPB-208ENST00000507009 TMEM105Q8N8V8 129 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 CYP2W1Q8TAV3 490 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 ATP8B4Q8TF62 1192 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 TMEM40Q8WWA1 233 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 SUSD6Q92537 303 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 MRPS27Q92552 414 aaKnown RBP6.57□□□□□ -1.36
GYPB-208ENST00000507009 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
GYPB-208ENST00000507009 ZNF558Q96NG5 402 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 MTRQ99707 1265 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 SPZ1Q9BXG8 430 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 S1PR5Q9H228 398 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 CWH43Q9H720 699 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 RGS18Q9NS28 235 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 TCEAL9Q9UHQ7 104 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 NR2E1Q9Y466 385 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 ZDBF2Q9HCK1 2354 aa6.57□□□□□ -1.36
GYPB-208ENST00000507009 CFAP54Q96N23 3096 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 FSD2A1L4K1 749 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 PRR23AA6NEV1 266 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 C9IYK1 514 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 PIK3CDO00329 1044 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 FSCN2O14926 492 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 GPR182O15218 404 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 DDAH1O94760 285 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 RPLP2P05387 115 aaKnown RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 FGFR4P22455 802 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 RFX1P22670 979 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 ID4P47928 161 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 METAP2P50579 478 aaKnown RBP eCLIP6.56□□□□□ -1.36
GYPB-208ENST00000507009 CLCN3P51790 818 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 ITGB3BPQ13352 177 aaPredicted RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 LONRF3Q496Y0 759 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 ODR4Q5SWX8 454 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 PDE12Q6L8Q7 609 aaKnown RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 KCNT2Q6UVM3 1135 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 FAM228AQ86W67 206 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 SMC5Q8IY18 1101 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 ADSSL1Q8N142 457 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 CRIPAKQ8N1N5 446 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 NME8Q8N427 588 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 TDRD5Q8NAT2 981 aaKnown RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 KCNG4Q8TDN1 519 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 IGDCC4Q8TDY8 1250 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 RUFY2Q8WXA3 655 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 AUTS2Q8WXX7 1259 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 CASP10Q92851 521 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 SCLT1Q96NL6 688 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 MXRA8Q9BRK3 442 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 LRRC2Q9BYS8 371 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 OSBPL3Q9H4L5 887 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 LY9Q9HBG7 655 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 NPDC1Q9NQX5 325 aaPredicted RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 KCNH7Q9NS40 1196 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 C1orf112Q9NSG2 853 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 TMEM161AQ9NX61 479 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 LIMD1Q9UGP4 676 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
GYPB-208ENST00000507009 SORCS3Q9UPU3 1222 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 AKT3Q9Y243 479 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 SQORQ9Y6N5 450 aa6.56□□□□□ -1.36
GYPB-208ENST00000507009 MYO10Q9HD67 2058 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 HBP1O60381 514 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 CXCL14O95715 111 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 MYBP10242 640 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 GNAQP50148 359 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 CRYBB1P53674 252 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 NAPAP54920 295 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 SMC1AQ14683 1233 aaKnown RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 SWSAP1Q6NVH7 229 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 Q6ZNB5 142 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 LRRC55Q6ZSA7 311 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 PLPPR4Q7Z2D5 763 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 MICU3Q86XE3 530 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 CCDC60Q8IWA6 550 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 MB21D2Q8IYB1 491 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 UBALD2Q8IYN6 164 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 KIAA0319LQ8IZA0 1049 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 TTC13Q8NBP0 860 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 HELQQ8TDG4 1101 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 NKD2Q969F2 451 aaPredicted RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 CASD1Q96PB1 797 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 LZTS2Q9BRK4 669 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 TMEM117Q9H0C3 514 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 IL21Q9HBE4 155 aa6.55□□□□□ -1.36
GYPB-208ENST00000507009 AGO4Q9HCK5 861 aaKnown RBP6.55□□□□□ -1.36
GYPB-208ENST00000507009 NGRNQ9NPE2 291 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms