RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GJD3Q8N144 294 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 KLHL23Q8NBE8 558 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 NLRP7Q8WX94 980 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 POP1Q99575 1024 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 KCNMB3Q9NPA1 279 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 ORC3Q9UBD5 711 aaPredicted RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 PUF60Q9UHX1 559 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 LZTS1Q9Y250 596 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 GAS2O43903 313 aaKnown RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 P4HBP07237 508 aaKnown RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 MTERF2Q49AM1 385 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 LRRC43Q8N309 656 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 POF1BQ8WVV4 589 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 CDCA3Q99618 268 aaPredicted RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 LARP6Q9BRS8 491 aaKnown RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 MRPL9Q9BYD2 267 aaKnown RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 MYO7AQ13402 2215 aa16.19■□□□□ 0.18
HMGCS1-203ENST00000507004 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 CCNT1O60563 726 aaKnown RBP16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 SRGAP2BP0DMP2 458 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 ALADP13716 330 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 KRT2P35908 639 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 AK2P54819 239 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 HYAL1Q12794 435 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 TRIM29Q14134 588 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 EPHA7Q15375 998 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 UGCGQ16739 394 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 OTUD6AQ7L8S5 288 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 SLC7A3Q8WY07 619 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 TRAIPQ9BWF2 469 aa16.18■□□□□ 0.18
HMGCS1-203ENST00000507004 SPTBN5Q9NRC6 3674 aaKnown RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 H3BQ06 376 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 IL9P15248 144 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 RFC5P40937 340 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 RAB27AP51159 221 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 PLCB3Q01970 1234 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 ADAM15Q13444 863 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 SMAD4Q13485 552 aaKnown RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 BMS1Q14692 1282 aaKnown RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 PIK3AP1Q6ZUJ8 805 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 ECHDC2Q86YB7 292 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 C4orf19Q8IY42 314 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 THNSL1Q8IYQ7 743 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 EFHBQ8N7U6 833 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 GTF3C6Q969F1 213 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 TLR9Q9NR96 1032 aa16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 TYW1Q9NV66 732 aaKnown RBP16.17■□□□□ 0.18
HMGCS1-203ENST00000507004 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 ASAP2O43150 1006 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 SLC37A4O43826 429 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 FGF18O76093 207 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 STBD1O95210 358 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 COL9A1P20849 921 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 IBSPP21815 317 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 NDUFV1P49821 464 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 KRT17Q04695 432 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 CAMK1Q14012 370 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 TMEM31Q5JXX7 168 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 FAM102BQ5T8I3 360 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 ADHFE1Q8IWW8 467 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 COLGALT1Q8NBJ5 622 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 MICAL1Q8TDZ2 1067 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 TCP11Q8WWU5 503 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 ZNF558Q96NG5 402 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 NGRNQ9NPE2 291 aaKnown RBP16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 CYP26B1Q9NR63 512 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 SUCLA2Q9P2R7 463 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 CD207Q9UJ71 328 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 ARIH1Q9Y4X5 557 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-203ENST00000507004 GPR37L1O60883 481 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 CENPBP07199 599 aaPredicted RBP16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 LTBRP36941 435 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 GATMP50440 423 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 SMAD2Q15796 467 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 FNDC1Q4ZHG4 1894 aaPredicted RBP16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 ANO5Q75V66 913 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 MRPS27Q92552 414 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 GJA10Q969M2 543 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 TLE6Q9H808 572 aa16.15■□□□□ 0.18
HMGCS1-203ENST00000507004 MBTPS2O43462 519 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 CTDNEP1O95476 244 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 FGFR1P11362 822 aa16.14■□□□□ 0.17
HMGCS1-203ENST00000507004 NEK4P51957 841 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms