RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 BAP1Q92560 729 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 CEP72Q9P209 647 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 STK17AQ9UEE5 414 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 NAGPAQ9UK23 515 aa10.4□□□□□ -0.74
PHF3-208ENST00000506783 A0A1W2PRG0 241 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 POC1B-GALNT4F8VUJ3 575 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 MAP3K6O95382 1288 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 ARP10275 920 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 PON1P27169 355 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 HSD17B3P37058 310 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 TUBB2AQ13885 445 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 LONRF1Q17RB8 773 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 DALRD3Q5D0E6 543 aaKnown RBP10.4□□□□□ -0.75
PHF3-208ENST00000506783 LRRC55Q6ZSA7 311 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 ARHGEF26Q96DR7 871 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 PRMT6Q96LA8 375 aaPredicted RBP10.4□□□□□ -0.75
PHF3-208ENST00000506783 TUBB2BQ9BVA1 445 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 AZI2Q9H6S1 392 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 SH3GLB2Q9NR46 395 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 PIM2Q9P1W9 311 aa10.4□□□□□ -0.75
PHF3-208ENST00000506783 MRC1P22897 1456 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 GPR75-ASB3A0A0A6YYF3 556 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 LAD1O00515 517 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 RGS16O15492 202 aaPredicted RBP10.39□□□□□ -0.75
PHF3-208ENST00000506783 PCP11498 1178 aaKnown RBP10.39□□□□□ -0.75
PHF3-208ENST00000506783 CD58P19256 250 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 MAGEA9P43362 315 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 RFX8Q6ZV50 586 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 GIMAP7Q8NHV1 300 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 CCDC26Q8TAB7 109 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 CBWD1Q9BRT8 395 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 LRRC27Q9C0I9 530 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 TMEM39BQ9GZU3 492 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 RAVER2Q9HCJ3 691 aaKnown RBP10.39□□□□□ -0.75
PHF3-208ENST00000506783 DAAM1Q9Y4D1 1078 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 EMSYQ7Z589 1322 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 ARFGEF2Q9Y6D5 1785 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 MSH4O15457 936 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 CBWD6Q4V339 395 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 ARSHQ5FYA8 562 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 CBWD3Q5JTY5 395 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 CBWD5Q5RIA9 395 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 UBAP2Q5T6F2 1119 aaKnown RBP10.39□□□□□ -0.75
PHF3-208ENST00000506783 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
PHF3-208ENST00000506783 KRT35Q92764 455 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 DNAJC19Q96DA6 116 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
PHF3-208ENST00000506783 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 EIF3HO15372 352 aaKnown RBP eCLIP10.38□□□□□ -0.752e-6■■■□□ 16.4
PHF3-208ENST00000506783 NOL4O94818 638 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 SHBGP04278 402 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CTNNA2P26232 953 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 SHMT1P34896 483 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 WDR93Q6P2C0 686 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 MIER3Q7Z3K6 550 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CCDC33Q8N5R6 958 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 KCNV2Q8TDN2 545 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 FMO2Q99518 471 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 HAUS2Q9NVX0 235 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 KCPQ6ZWJ8 1503 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 MYL7Q01449 175 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 NAA25Q14CX7 972 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 GALNT17Q6IS24 598 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 FBXO25Q8TCJ0 367 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 PPP1R13LQ8WUF5 828 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CPA5Q8WXQ8 436 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 ZNF653Q96CK0 615 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 RPGRIP1Q96KN7 1286 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 PVALEFA0A1B0GWK0 134 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 GOLGA8KD6RF30 607 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 OPLAHO14841 1288 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 PLSCR1O15162 318 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CAND2O75155 1236 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 SESN3P58005 492 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 IFI35P80217 286 aaPredicted RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 DR1Q01658 176 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CETN1Q12798 172 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 GIT2Q14161 759 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 DENND2CQ68D51 928 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 NLRP14Q86W24 1093 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
PHF3-208ENST00000506783 C9orf72Q96LT7 481 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 PARVGQ9HBI0 331 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 RNF19AQ9NV58 838 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 CCPG1Q9ULG6 757 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 MYO3BQ8WXR4 1341 aa10.38□□□□□ -0.75
PHF3-208ENST00000506783 ANO9A1A5B4 782 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 CLDN3O15551 220 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 SKAP2O75563 359 aaPredicted RBP10.37□□□□□ -0.75
PHF3-208ENST00000506783 RCAN1P53805 252 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 SLC29A2Q14542 456 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 MEA1Q16626 185 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 HGSNATQ68CP4 663 aa10.37□□□□□ -0.75
PHF3-208ENST00000506783 SCARA5Q6ZMJ2 495 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms