RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KBTBD4Q9NVX7 518 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 SUCLA2Q9P2R7 463 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-210ENST00000506767 PRKAG2Q9UGJ0 569 aa14.27□□□□□ -0.13
TCOF1-210ENST00000506767 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-210ENST00000506767 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 RSPH10B2B2RC85 870 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 ASAP2O43150 1006 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 GADD45BO75293 160 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 VTNP04004 478 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 SSBP05455 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 RSPH10BP0C881 870 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 RAG1P15918 1043 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 SYN1P17600 705 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 GPC3P51654 580 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 CDC42EP1Q00587 391 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 SV2BQ7L1I2 683 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 DAW1Q8N136 415 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 ENGASEQ8NFI3 743 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 PRPF31Q8WWY3 499 aaKnown RBP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 DHX58Q96C10 678 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 CELF4Q9BZC1 486 aaKnown RBP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 ADAMTS10Q9H324 1103 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 CDHR5Q9HBB8 845 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 GPRC5CQ9NQ84 441 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 USP25Q9UHP3 1055 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-210ENST00000506767 AKT3Q9Y243 479 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
TCOF1-210ENST00000506767 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 PRPF40AO75400 957 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 CTSHP09668 335 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SLFN14P0C7P3 912 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SYKP43405 635 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 CCL23P55773 120 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 NLRP11P59045 1033 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 POU5F1BQ06416 359 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 TMEM62Q0P6H9 643 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 LAMTOR4Q0VGL1 99 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 MAPK7Q13164 816 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 DHX8Q14562 1220 aaKnown RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 LONRF3Q496Y0 759 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 MAEAQ7L5Y9 396 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 GPBP1Q86WP2 473 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 FMR1NBQ8N0W7 255 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 ASAP3Q8TDY4 903 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 VWCEQ96DN2 955 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SCLYQ96I15 445 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 POLR3FQ9H1D9 316 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-210ENST00000506767 TNMDQ9H2S6 317 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SERTAD1Q9UHV2 236 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 COL4A3BPQ9Y5P4 624 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 TRPV2Q9Y5S1 764 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SQORQ9Y6N5 450 aa14.25□□□□□ -0.13
TCOF1-210ENST00000506767 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 MYMKA6NI61 221 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 M0QZ92 97 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 NBNO60934 754 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 HIP1RO75146 1068 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 ZNF202O95125 648 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 CXCL10P02778 98 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 GLRA2P23416 452 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 RFC2P35250 354 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 CRYBB1P53674 252 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-210ENST00000506767 UBE2HP62256 183 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 GIT2Q14161 759 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 KIZQ2M2Z5 673 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 FAM102BQ5T8I3 360 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 ZNF410Q86VK4 478 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 KSR1Q8IVT5 923 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 KIFAP3Q92845 792 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 BADQ92934 168 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 DNAJC19Q96DA6 116 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 OSBPL7Q9BZF2 842 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 POLD4Q9HCU8 107 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 ODF2LQ9ULJ1 636 aa14.24□□□□□ -0.13
TCOF1-210ENST00000506767 CEP290O15078 2479 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 A0A087WZ62 844 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 CSF2RAP15509 400 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 ZNF131P52739 623 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 FAM160A1Q05DH4 1040 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 CAPSQ13938 189 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 FBXO47Q5MNV8 452 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 CNNM4Q6P4Q7 775 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 CHRDL2Q6WN34 429 aa14.23□□□□□ -0.13
TCOF1-210ENST00000506767 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-210ENST00000506767 TMEM40Q8WWA1 233 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms