RNA–Protein interactions for RNA: ENST00000506464.5

ABCC3-208, Transcript of ATP binding cassette subfamily C member 3, human

TSL 4

Gene ABCC3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCC3-208	ENST00000506464	PIK3AP1	Q6ZUJ8	805 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	ZNF410	Q86VK4	478 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	SCLT1	Q96NL6	688 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	ADAMTS10	Q9H324	1103 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	CDHR5	Q9HBB8	845 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	ATP6V0A4	Q9HBG4	840 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	CHST12	Q9NRB3	414 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	DACT1	Q9NYF0	836 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	PCDHB12	Q9Y5F1	795 aa		13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	MRPL42	Q9Y6G3	142 aa	Known RBP	13.73	□□□□□ -0.21
ABCC3-208	ENST00000506464	KIAA1671	Q9BY89	1806 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	IGKV6-21	A0A0C4DH24	114 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	SLC37A4	O43826	429 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	SKI	P12755	728 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	DARS	P14868	501 aa	Known RBP	13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	DSC3	Q14574	896 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	MTERF2	Q49AM1	385 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	TCEAL5	Q5H9L2	206 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	LRRC71	Q8N4P6	559 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	NEK9	Q8TD19	979 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	NLRP7	Q8WX94	980 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	LLPH	Q9BRT6	129 aa	Known RBP	13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	VAV3	Q9UKW4	847 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	PLAGL2	Q9UPG8	496 aa		13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCC3-208	ENST00000506464	DDX11L8	A8MPP1	907 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	GRM6	O15303	877 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	MGEA5	O60502	916 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	MAF	O75444	373 aa	Predicted RBP	13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	EOMES	O95936	686 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	LAG3	P18627	525 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	KCNA5	P22460	613 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	SFPQ	P23246	707 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	RFC5	P40937	340 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	EPHA7	Q15375	998 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	PDE12	Q6L8Q7	609 aa	Known RBP	13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	OTUD6A	Q7L8S5	288 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	C4orf19	Q8IY42	314 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	SLC7A3	Q8WY07	619 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	TMEM117	Q9H0C3	514 aa		13.71	□□□□□ -0.21
ABCC3-208	ENST00000506464	XIRP2	A4UGR9	3374 aa		13.71	□□□□□ -0.22
ABCC3-208	ENST00000506464	TCF20	Q9UGU0	1960 aa	Known RBP	13.71	□□□□□ -0.22
ABCC3-208	ENST00000506464	NCOR1	O75376	2440 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	TBKBP1	A7MCY6	615 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	STBD1	O95210	358 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	SAFB	Q15424	915 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	PAN2	Q504Q3	1202 aa	Known RBP	13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	SPOUT1	Q5T280	376 aa	Known RBP	13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	ANO5	Q75V66	913 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	ABI1	Q8IZP0	508 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	OXER1	Q8TDS5	423 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	TCP11	Q8WWU5	503 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	HAS1	Q92839	578 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	TNFRSF25	Q93038	417 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	GJA10	Q969M2	543 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	TMX3	Q96JJ7	454 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	CEP89	Q96ST8	783 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	PPP1R16B	Q96T49	567 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	TRAIP	Q9BWF2	469 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	ZSWIM4	Q9H7M6	989 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	CYP26B1	Q9NR63	512 aa		13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.7	□□□□□ -0.22
ABCC3-208	ENST00000506464		A0A0U1RQF3	1178 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	ASAP2	O43150	1006 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	ITGB1	P05556	798 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	PPM1A	P35813	382 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	FOSB	P53539	338 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	ORC2	Q13416	577 aa	Predicted RBP	13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	CTC1	Q2NKJ3	1217 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	ECHDC2	Q86YB7	292 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	LRRC43	Q8N309	656 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	KLHL23	Q8NBE8	558 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	SPPL3	Q8TCT6	385 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	CEP170P1	Q96L14	293 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	C1QTNF1	Q9BXJ1	281 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	MRPL9	Q9BYD2	267 aa	Known RBP	13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	PRKAG3	Q9UGI9	489 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	LZTS1	Q9Y250	596 aa		13.69	□□□□□ -0.22
ABCC3-208	ENST00000506464	ATG2A	Q2TAZ0	1938 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	GRXCR2	A6NFK2	248 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	EML1	O00423	815 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	YWHAB	P31946	246 aa	Known RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	RAB27A	P51159	221 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	POLG	P54098	1239 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	HMGN5	P82970	282 aa	Known RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	NR5A1	Q13285	461 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	CALCRL	Q16602	461 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	EARS2	Q5JPH6	523 aa	Known RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	POTED	Q86YR6	584 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	RHPN2	Q8IUC4	686 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	DIS3L2	Q8IYB7	885 aa	Known RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	POF1B	Q8WVV4	589 aa		13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	PSPC1	Q8WXF1	523 aa	Known RBP	13.68	□□□□□ -0.22
ABCC3-208	ENST00000506464	CDCA3	Q99618	268 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms