RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 CHMP4CQ96CF2 233 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF396Q96N95 335 aaPredicted RBP6.62□□□□□ -1.35
SCLT1-207ENST00000506233 BLZF1Q9H2G9 400 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF70Q9UC06 446 aaPredicted RBP6.62□□□□□ -1.35
SCLT1-207ENST00000506233 CCDC39Q9UFE4 941 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 LZTS1Q9Y250 596 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 HRH3Q9Y5N1 445 aa6.62□□□□□ -1.35
SCLT1-207ENST00000506233 CHD7Q9P2D1 2997 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 MYMKA6NI61 221 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 UPK3BL1B0FP48 263 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 UPK3BL2E5RIL1 263 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 GIPC1O14908 333 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 FXR1P51114 621 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 PERM1Q5SV97 790 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 RAD9BQ6WBX8 426 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 CATIPQ7Z7H3 387 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 FGD4Q96M96 766 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF446Q9NWS9 450 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 SWAP70Q9UH65 585 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF236Q9UL36 1845 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 TSPY2A6NKD2 308 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 GOLGA6L22H0YM25 854 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 CDKL5O76039 1030 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 NDUFB10O96000 172 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 F2P00734 622 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 L1CAMP32004 1257 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 FSTL1Q12841 308 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 ASTE1Q2TB18 679 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 TMEM95Q3KNT9 176 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 CFAP100Q494V2 611 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 SP7Q8TDD2 431 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 TBCKQ8TEA7 893 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 LRCH3Q96II8 777 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 LIMA1Q9UHB6 759 aaKnown RBP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 CTAGE5O15320 804 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 MED24O75448 989 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 TTLL1O95922 423 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 FCGRTP55899 365 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 PICALMQ13492 652 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 GRAMD1BQ3KR37 738 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 CT47A1Q5JQC4 288 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 TOGARAM2Q6ZUX3 1019 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-207ENST00000506233 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 COG1Q8WTW3 980 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 C7orf25Q9BPX7 421 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 UBAC1Q9BSL1 405 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 GPR88Q9GZN0 384 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 KCNMB2Q9Y691 235 aa6.61□□□□□ -1.35
SCLT1-207ENST00000506233 VSTM5A8MXK1 200 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 PMLP29590 882 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 GSTT1P30711 240 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 INPP5BP32019 993 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 CIITAP33076 1130 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 KCNJ6P48051 423 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 GSTO1P78417 241 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 QRICH1Q2TAL8 776 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TPH2Q8IWU9 490 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 VPS37AQ8NEZ2 397 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TRIM9Q9C026 710 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MRPL44Q9H9J2 332 aaKnown RBP6.6□□□□□ -1.35
SCLT1-207ENST00000506233 CHD9Q3L8U1 2897 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 ALG1L2C9J202 215 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 GDF11O95390 407 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 POU5F1BQ06416 359 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 KCNMA1Q12791 1236 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TRDNQ13061 729 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 GALEQ14376 348 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TLR1Q15399 786 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 USP17L6PQ6QN14 398 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 LRRC69Q6ZNQ3 347 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 DAW1Q8N136 415 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MYRIPQ8NFW9 859 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 IL31RAQ8NI17 732 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 NKD1Q969G9 470 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 L2HGDHQ9H9P8 463 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TMX2Q9Y320 296 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MCM3APO60318 1980 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 PLA2G6O60733 806 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 ENTPD3O75355 529 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TSPY3P0CV98 308 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TSPY8P0CW00 308 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MCM7P33993 719 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 LIG3P49916 1009 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 HSD17B4P51659 736 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 RASSF7Q02833 373 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MAPK7Q13164 816 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 SETDB1Q15047 1291 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 MLC1Q15049 377 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 Q4G0T1 1027 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 YOD1Q5VVQ6 348 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-207ENST00000506233 NFXL1Q6ZNB6 911 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 SPC24Q8NBT2 197 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 TMEM174Q8WUU8 243 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 IFNKQ9P0W0 207 aa6.6□□□□□ -1.35
SCLT1-207ENST00000506233 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms