RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 PLA2G4DQ86XP0 818 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 SUGP1Q8IWZ8 645 aaKnown RBP11.75□□□□□ -0.53
BRIX1-202ENST00000506023 C12orf76Q8N812 135 aaPredicted RBP11.75□□□□□ -0.53
BRIX1-202ENST00000506023 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 GJA10Q969M2 543 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 TMEM117Q9H0C3 514 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 ELAC1Q9H777 363 aaKnown RBP11.75□□□□□ -0.53
BRIX1-202ENST00000506023 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 HCFC2Q9Y5Z7 792 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 FRYLO94915 3013 aa11.75□□□□□ -0.53
BRIX1-202ENST00000506023 TMEM150BA6NC51 233 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 GFRA3O60609 400 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 ASGR2P07307 311 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 CPA1P15085 419 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 LAG3P18627 525 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 SLC26A2P50443 739 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 NLRP11P59045 1033 aaKnown RBP11.74□□□□□ -0.53
BRIX1-202ENST00000506023 PKN1Q16512 942 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 NIPA1Q7RTP0 329 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 ECHDC2Q86YB7 292 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 SLC39A11Q8N1S5 342 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
BRIX1-202ENST00000506023 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 LZTS1Q9Y250 596 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 COL4A3Q01955 1670 aa11.74□□□□□ -0.53
BRIX1-202ENST00000506023 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
BRIX1-202ENST00000506023 GPR182O15218 404 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 ST18O60284 1047 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 CLASP2O75122 1294 aaKnown RBP11.73□□□□□ -0.53
BRIX1-202ENST00000506023 CYP3A4P08684 503 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 ADD1P35611 737 aaKnown RBP11.73□□□□□ -0.53
BRIX1-202ENST00000506023 AP3B2Q13367 1082 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 RTN1Q16799 776 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 FANCMQ8IYD8 2048 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 METTL13Q8N6R0 699 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 HELQQ8TDG4 1101 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
BRIX1-202ENST00000506023 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 GABBR1Q9UBS5 961 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 MTCL1Q9Y4B5 1905 aaKnown RBP11.73□□□□□ -0.53
BRIX1-202ENST00000506023 CACNA1AO00555 2505 aa11.73□□□□□ -0.53
BRIX1-202ENST00000506023 TDRD15B5MCY1 1934 aaKnown RBP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 STBD1O95210 358 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 FOSP01100 380 aaPredicted RBP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 EPCAMP16422 314 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 METAP2P50579 478 aaKnown RBP eCLIP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 GPC3P51654 580 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 CWF19L1Q69YN2 538 aaKnown RBP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 MIS18BP1Q6P0N0 1132 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 LRRC43Q8N309 656 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 MRPL43Q8N983 215 aaKnown RBP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 ATOH1Q92858 354 aaPredicted RBP11.72□□□□□ -0.53
BRIX1-202ENST00000506023 LPPQ93052 612 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 SH2D3AQ9BRG2 576 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 TSHZ2Q9NRE2 1034 aa11.72□□□□□ -0.53
BRIX1-202ENST00000506023 KLF18A0A0U1RQI7 1052 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ZBTB43O43298 467 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ZNF76P36508 570 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 LONRF3Q496Y0 759 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 RARS2Q5T160 578 aaKnown RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 EFCAB12Q6NXP0 572 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 TMC7Q7Z402 723 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 RNF169Q8NCN4 708 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ZNF558Q96NG5 402 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ADAM7Q9H2U9 754 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.53
BRIX1-202ENST00000506023 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
BRIX1-202ENST00000506023 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 PRR23AA6NEV1 266 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 MSH4O15457 936 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 PI15O43692 258 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 DARSP14868 501 aaKnown RBP11.7□□□□□ -0.54
BRIX1-202ENST00000506023 NPR3P17342 541 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
BRIX1-202ENST00000506023 BCAR1P56945 870 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 TARBP2Q15633 366 aaKnown RBP11.7□□□□□ -0.54
BRIX1-202ENST00000506023 PRR16Q569H4 304 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 CKAP2LQ8IYA6 745 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 SLC22A17Q8WUG5 538 aa11.7□□□□□ -0.54
BRIX1-202ENST00000506023 TNPO1Q92973 898 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms