RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 MARCH8Q5T0T0 291 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 RESP18Q5W5W9 173 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 SMRP1Q8NCR6 262 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 SPPL3Q8TCT6 385 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 DNAJB3Q8WWF6 145 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 CUL5Q93034 780 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 C6orf50Q9HD87 102 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 ALG13Q9NP73 1137 aaKnown RBP12.05□□□□□ -0.48
CPNE4-206ENST00000505957 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
CPNE4-206ENST00000505957 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
CPNE4-206ENST00000505957 CDY2AQ9Y6F7 541 aa12.05□□□□□ -0.48
CPNE4-206ENST00000505957 TTC3P53804 2025 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 TECTAO75443 2155 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 GSTTP1A0A1W2PQM5 241 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 LOC730098B7Z3J9 87 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 MAFGO15525 162 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 KINO60870 393 aaKnown RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 ITGB1P05556 798 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 STAG3L1P0CL83 205 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 KCNA2P16389 499 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 PTPN5P54829 565 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 NAPAP54920 295 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 MRPS6P82932 125 aaKnown RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 SP4Q02446 784 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 TTC38Q5R3I4 469 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 IER5Q5VY09 327 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 USP17L6PQ6QN14 398 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 KRT25Q7Z3Z0 450 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 TNMDQ9H2S6 317 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 SMARCAD1Q9H4L7 1026 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 CLEC1BQ9P126 229 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 PCDHA6Q9UN73 950 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 PCDHB6Q9Y5E3 794 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 PCDHA8Q9Y5H6 950 aa12.04□□□□□ -0.48
CPNE4-206ENST00000505957 MRPL42Q9Y6G3 142 aaKnown RBP12.04□□□□□ -0.48
CPNE4-206ENST00000505957 TMEM221A6NGB7 291 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 M0R296 226 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 LAD1O00515 517 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 ATP9AO75110 1047 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 CAVIN2O95810 425 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 CCDC192P0DO97 292 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE4-206ENST00000505957 DNAJB1P25685 340 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 CD52P31358 61 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 ZXDAP98168 799 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 ARL6IP4Q66PJ3 421 aaKnown RBP12.03□□□□□ -0.48
CPNE4-206ENST00000505957 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 RTN4RL1Q86UN2 441 aaPredicted RBP12.03□□□□□ -0.48
CPNE4-206ENST00000505957 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 PRSS33Q8NF86 280 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 GLG1Q92896 1179 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
CPNE4-206ENST00000505957 CCDC194A0A1B0GVG4 234 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 SMCO2A6NFE2 343 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 PFKFB1P16118 471 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 ATF7P17544 494 aaPredicted RBP12.02□□□□□ -0.49
CPNE4-206ENST00000505957 ITGB5P18084 799 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 MARK3P27448 753 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 MARCKSP29966 332 aaPredicted RBP12.02□□□□□ -0.49
CPNE4-206ENST00000505957 NDUFA8P51970 172 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 UBE3AQ05086 875 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 UVSSAQ2YD98 709 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 MCTP2Q6DN12 878 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 ADGRD2Q7Z7M1 963 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 POF1BQ8WVV4 589 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 PHF7Q9BWX1 381 aaPredicted RBP12.02□□□□□ -0.49
CPNE4-206ENST00000505957 RIC8AQ9NPQ8 531 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 UBIAD1Q9Y5Z9 338 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 KDM3AQ9Y4C1 1321 aa12.02□□□□□ -0.49
CPNE4-206ENST00000505957 BAZ2BQ9UIF8 2168 aaKnown RBP12.02□□□□□ -0.49
CPNE4-206ENST00000505957 M0QZ92 97 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 GLP2RO95838 553 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 INSRRP14616 1297 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 SYKP43405 635 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 NRIP1P48552 1158 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 ADCY7P51828 1080 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 MTMR1Q13613 665 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 NONOQ15233 471 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 IER5LQ5T953 404 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 SUGP1Q8IWZ8 645 aaKnown RBP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 REXO1Q8N1G1 1221 aaKnown RBP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 NME8Q8N427 588 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 FBXL6Q8N531 539 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 PIBF1Q8WXW3 757 aa12.01□□□□□ -0.49
CPNE4-206ENST00000505957 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
CPNE4-206ENST00000505957 RBSNQ9H1K0 784 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms