RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SUSD6Q92537 303 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 GJA10Q969M2 543 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 LENG9Q96B70 501 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 RPGRIP1Q96KN7 1286 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 POP1Q99575 1024 aaKnown RBP6.65□□□□□ -1.34
GYPB-205ENST00000505583 APOL5Q9BWW9 433 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 UPF3BQ9BZI7 483 aaKnown RBP6.65□□□□□ -1.34
GYPB-205ENST00000505583 S1PR5Q9H228 398 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 ZNF302Q9NR11 478 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 TLR9Q9NR96 1032 aa6.65□□□□□ -1.34
GYPB-205ENST00000505583 RBM28Q9NW13 759 aaKnown RBP6.65□□□□□ -1.34
GYPB-205ENST00000505583 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
GYPB-205ENST00000505583 COL1A2P08123 1366 aa6.65□□□□□ -1.35
GYPB-205ENST00000505583 DENND3A2RUS2 1198 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 TMEM150BA6NC51 233 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 TMEM221A6NGB7 291 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 M0R296 226 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 ZNF862O60290 1169 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 CSDE1O75534 798 aaKnown RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 FGFR4P22455 802 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 SP100P23497 879 aaPredicted RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 CRYBB1P53674 252 aaPredicted RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 VCPP55072 806 aaKnown RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 NLRP11P59045 1033 aaKnown RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 ZXDAP98168 799 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 TCF15Q12870 199 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 AP3B2Q13367 1082 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 DRP2Q13474 957 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 UGCGQ16739 394 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 PFKFB3Q16875 520 aaPredicted RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 PRR16Q569H4 304 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 ZNF484Q5JVG2 852 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 CLLU1OSQ5K130 101 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 SPOUT1Q5T280 376 aaKnown RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 PLPP4Q5VZY2 271 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 FAM160B1Q5W0V3 765 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 MIS18BP1Q6P0N0 1132 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 SYCE2Q6PIF2 218 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 SYNE3Q6ZMZ3 975 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 BMP8AQ7Z5Y6 402 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 THNSL1Q8IYQ7 743 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 LRRC71Q8N4P6 559 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 METTL13Q8N6R0 699 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 TNPO1Q92973 898 aaKnown RBP6.64□□□□□ -1.35
GYPB-205ENST00000505583 PBXIP1Q96AQ6 731 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 ZNF577Q9BSK1 485 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 ADAMTS10Q9H324 1103 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 SMOC2Q9H3U7 446 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 C1orf112Q9NSG2 853 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 TMEM161AQ9NX61 479 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 GABBR1Q9UBS5 961 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
GYPB-205ENST00000505583 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 GPR182O15218 404 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 PDGFBP01127 241 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 ATF7P17544 494 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 PLXNA3P51805 1871 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 PLCB3Q01970 1234 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 UBE3AQ05086 875 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 NTRK3Q16288 839 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 BMP2KLQ5H9B9 411 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 ZNF746Q6NUN9 644 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 EFCAB12Q6NXP0 572 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 ANKRD54Q6NXT1 300 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 LLGL2Q6P1M3 1020 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 KCNT2Q6UVM3 1135 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 TMEM184AQ6ZMB5 413 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 TMEM173Q86WV6 379 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 MRPS27Q92552 414 aaKnown RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 PHKBQ93100 1093 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 PPP2R3CQ969Q6 453 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 ASIC4Q96FT7 647 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 MFSD14AQ96MC6 490 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 SH2D3AQ9BRG2 576 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 PHF7Q9BWX1 381 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 ZMYND12Q9H0C1 365 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 TMEM117Q9H0C3 514 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 KCNH6Q9H252 994 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 ELAC1Q9H777 363 aaKnown RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 ATP6V0A4Q9HBG4 840 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
GYPB-205ENST00000505583 PCDHA10Q9Y5I2 948 aa6.63□□□□□ -1.35
GYPB-205ENST00000505583 MYO10Q9HD67 2058 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 NID2Q14112 1375 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 MEIS3P2A8K0S8 358 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 NT5C1B-RDH14C9J2C7 533 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 hCG_1984214I3L0E3 225 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 MSH4O15457 936 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 PRPF3O43395 683 aaKnown RBP6.62□□□□□ -1.35
GYPB-205ENST00000505583 CHMP2AO43633 222 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 B4GALT3O60512 393 aa6.62□□□□□ -1.35
GYPB-205ENST00000505583 STBD1O95210 358 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms