RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 FAN1Q9Y2M0 1017 aa21.29■■□□□ 1
SDHA-206ENST00000505555 GTPBP10A4D1E9 387 aaKnown RBP21.29■■□□□ 1
SDHA-206ENST00000505555 K7ENM7 598 aa21.29■■□□□ 1
SDHA-206ENST00000505555 STRA6Q9BX79 667 aa21.29■■□□□ 1
SDHA-206ENST00000505555 PCIF1Q9H4Z3 704 aa21.29■■□□□ 1
SDHA-206ENST00000505555 TSKSQ9UJT2 592 aa21.29■■□□□ 1
SDHA-206ENST00000505555 EXOC3O60645 756 aa21.28■■□□□ 1
SDHA-206ENST00000505555 PPP1R37O75864 691 aa21.28■■□□□ 1
SDHA-206ENST00000505555 ZBTB7AO95365 584 aa21.28■■□□□ 1
SDHA-206ENST00000505555 NOP2P46087 812 aaKnown RBP21.28■■□□□ 1
SDHA-206ENST00000505555 TNIP1Q15025 636 aa21.28■■□□□ 1
SDHA-206ENST00000505555 CFAP221Q4G0U5 840 aa21.28■■□□□ 1
SDHA-206ENST00000505555 PCNX4Q63HM2 1172 aa21.28■■□□□ 1
SDHA-206ENST00000505555 WNK4Q96J92 1243 aa21.28■■□□□ 1
SDHA-206ENST00000505555 MKNK1Q9BUB5 465 aa21.28■■□□□ 1
SDHA-206ENST00000505555 SELENOOQ9BVL4 669 aa21.28■■□□□ 1
SDHA-206ENST00000505555 HPCAL4Q9UM19 191 aa21.28■■□□□ 1
SDHA-206ENST00000505555 UBE4BO95155 1302 aa21.28■■□□□ 1
SDHA-206ENST00000505555 CCDC66A2RUB6 948 aa21.28■■□□□ 1
SDHA-206ENST00000505555 ATP9AO75110 1047 aa21.28■■□□□ 1
SDHA-206ENST00000505555 VCAM1P19320 739 aa21.28■■□□□ 1
SDHA-206ENST00000505555 PLEKHA4Q9H4M7 779 aa21.28■■□□□ 1
SDHA-206ENST00000505555 PPP1R1BQ9UD71 204 aaPredicted RBP21.28■■□□□ 1
SDHA-206ENST00000505555 DDX3XO00571 662 aaKnown RBP eCLIP21.27■■□□□ 13e-24■■■□□ 15.1
SDHA-206ENST00000505555 UGCGQ16739 394 aa21.27■■□□□ 1
SDHA-206ENST00000505555 TBC1D10BQ4KMP7 808 aaPredicted RBP21.27■■□□□ 1
SDHA-206ENST00000505555 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
SDHA-206ENST00000505555 NEK9Q8TD19 979 aa21.27■■□□□ 1
SDHA-206ENST00000505555 RPAP3Q9H6T3 665 aaPredicted RBP21.27■■□□□ 1
SDHA-206ENST00000505555 DNAJC12Q9UKB3 198 aa21.27■■□□□ 1
SDHA-206ENST00000505555 EVI5O60447 810 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 QARSP47897 775 aaKnown RBP21.27■□□□□ 0.99
SDHA-206ENST00000505555 RARRES1P49788 294 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 PGM5Q15124 567 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 C10orf76Q5T2E6 689 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 NIPA1Q7RTP0 329 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 U2AF1L4Q8WU68 220 aaKnown RBP21.27■□□□□ 0.99
SDHA-206ENST00000505555 PPP1R9AQ9ULJ8 1098 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 FZD1Q9UP38 647 aa21.27■□□□□ 0.99
SDHA-206ENST00000505555 CTNND1O60716 968 aaKnown RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 STAT1P42224 750 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 BAG6P46379 1132 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 ZNF280AP59817 542 aaPredicted RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 DLG4P78352 724 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 SF3B2Q13435 895 aaKnown RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 DRAP1Q14919 205 aaPredicted RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 HSP90B2PQ58FF3 399 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 NBPF12Q5TAG4 269 aaPredicted RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 NSMFQ6X4W1 530 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
SDHA-206ENST00000505555 INTS2Q9H0H0 1204 aaKnown RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 CTDP1Q9Y5B0 961 aaPredicted RBP21.26■□□□□ 0.99
SDHA-206ENST00000505555 A0A0U1RQG5 324 aaPredicted RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 F8VZ95 297 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 NFKBIEO00221 500 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 TNFAIP1Q13829 316 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 PRAMEF18Q5VWM3 479 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 ZSWIM2Q8NEG5 633 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 RMDN3Q96TC7 470 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 VIPAS39Q9H9C1 493 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 GPRC5CQ9NQ84 441 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 LARSQ9P2J5 1176 aaKnown RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 NENFQ9UMX5 172 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 RIPK3Q9Y572 518 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 BTNL10A8MVZ5 291 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 FERP16591 822 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 YWHABP31946 246 aaKnown RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 SOX5P35711 763 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 BFSP1Q12934 665 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 C8orf74Q6P047 294 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 MICALL2Q8IY33 904 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 LNX1Q8TBB1 728 aaPredicted RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 AENQ8WTP8 325 aaKnown RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 RIN2Q8WYP3 895 aaPredicted RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 STK33Q9BYT3 514 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 GPR88Q9GZN0 384 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
SDHA-206ENST00000505555 ZC3H4Q9UPT8 1303 aaKnown RBP21.25■□□□□ 0.99
SDHA-206ENST00000505555 TMCO5BA8MYB1 307 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 TULP1O00294 542 aaPredicted RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 LRRN2O75325 713 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 SYF2O95926 243 aaKnown RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 MYL7Q01449 175 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 GHRHRQ02643 423 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 ARHGAP44Q17R89 818 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 VPS36Q86VN1 386 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 GLYCTKQ8IVS8 523 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 GOLGA5Q8TBA6 731 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 CBWD1Q9BRT8 395 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 ACBD3Q9H3P7 528 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 STIM2Q9P246 746 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 DBR1Q9UK59 544 aaKnown RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 GJA3Q9Y6H8 435 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 TESPA1A2RU30 521 aaPredicted RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 BACH1O14867 736 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
SDHA-206ENST00000505555 PPP2R5AQ15172 486 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 RNF207Q6ZRF8 634 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 LRRC57Q8N9N7 239 aa21.24■□□□□ 0.99
SDHA-206ENST00000505555 OLIG1Q8TAK6 271 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms