RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PTPN22Q9Y2R2 807 aa4.87□□□□□ -1.63
TRAPPC13-208ENST00000505553 B3GALT1Q9Y5Z6 326 aa4.87□□□□□ -1.63
TRAPPC13-208ENST00000505553 SCDO00767 359 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 ABLIM1O14639 778 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 PMM2O15305 246 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 PRICKLE3O43900 615 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MAFKO60675 156 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 COL6A2P12110 1019 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MTHFD2P13995 350 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 AGXTP21549 392 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 PDCD1Q15116 288 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 FSCN1Q16658 493 aaKnown RBP4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 ATAT1Q5SQI0 421 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MROH9Q5TGP6 573 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 CYB5RLQ6IPT4 315 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 NLRP10Q86W26 655 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 DPF3Q92784 378 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 DLG3Q92796 817 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MAP3K14Q99558 947 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MAF1Q9H063 256 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 SLC12A5Q9H2X9 1139 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 ZMAT4Q9H898 229 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 CNTD2Q9H8S5 307 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 SLC6A20Q9NP91 592 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 NLRC4Q9NPP4 1024 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 KCNH7Q9NS40 1196 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 KLHL11Q9NVR0 708 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 DSEQ9UL01 958 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 PHTF1Q9UMS5 762 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 SRPK3Q9UPE1 567 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 GPR45Q9Y5Y3 372 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 X6R8D5 127 aa4.86□□□□□ -1.63
TRAPPC13-208ENST00000505553 TCRBV5S4A2TA0A5A2 114 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 TMEM82A0PJX8 343 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 NOTOA8MTQ0 251 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 C22orf46C9J442 243 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 KCNK3O14649 394 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 NKRFO15226 690 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 NPHP1O15259 732 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 WDHD1O75717 1129 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 TCEA3O75764 348 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ZBED1O96006 694 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 HRGP04196 525 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 POU2F2P09086 479 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 PNLIPP16233 465 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 RHCEP18577 417 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ENPP1P22413 925 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 PTX3P26022 381 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 GJA4P35212 333 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 FNTBP49356 437 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 AK2P54819 239 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 RTP1P59025 263 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ADAM17P78536 824 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 RHDQ02161 417 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 EPHA7Q15375 998 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 RIOX2Q8IUF8 465 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 TEX2Q8IWB9 1127 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ACRBPQ8NEB7 543 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 MZB1Q8WU39 189 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 TGFBRAP1Q8WUH2 860 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 HHIPL1Q96JK4 782 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 PWWP2AQ96N64 755 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 MYD88Q99836 296 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 PPCSQ9HAB8 311 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 PLCB1Q9NQ66 1216 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ZNF277Q9NRM2 450 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 GNL3LQ9NVN8 582 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 ERVK13-1Q9NX77 482 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 TNFRSF10DQ9UBN6 386 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 MSRAQ9UJ68 235 aa4.85□□□□□ -1.63
TRAPPC13-208ENST00000505553 FGAP02671 866 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 FPR2P25090 351 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 VIPR1P32241 457 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 ARL4AP40617 200 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 GDF5P43026 501 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 MTNR1BP49286 362 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 SLC5A3P53794 718 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 USP14P54578 494 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 CORO7P57737 925 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 POU5F1BQ06416 359 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 GALEQ14376 348 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 TMEM132BQ14DG7 1078 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 CHRNA2Q15822 529 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 UGT8Q16880 541 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 INO80DQ53TQ3 878 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 FAM83BQ5T0W9 1011 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 CYP4F22Q6NT55 531 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 GALNT18Q6P9A2 607 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 FAM186BQ8IYM0 893 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 TMEFF1Q8IYR6 380 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 IFNL2Q8IZJ0 200 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 TMEM52Q8NDY8 209 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 NLGN2Q8NFZ4 835 aa4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 UHMK1Q8TAS1 419 aaKnown RBP4.84□□□□□ -1.63
TRAPPC13-208ENST00000505553 HPS3Q969F9 1004 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms