RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 DDX12PQ92771 950 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 CCDC47Q96A33 483 aaKnown RBP11.38□□□□□ -0.59
RFC1-210ENST00000505077 ABHD8Q96I13 439 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 REEP2Q9BRK0 252 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 SETD4Q9NVD3 440 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 RMND1Q9NWS8 449 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 SEL1LQ9UBV2 794 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 SCN5AQ14524 2016 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 MICAL3Q7RTP6 2002 aa11.38□□□□□ -0.59
RFC1-210ENST00000505077 PHLPP2Q6ZVD8 1323 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 PDE4DIPQ5VU43 2346 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 PVALEFA0A1B0GWK0 134 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 MYMKA6NI61 221 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 ASAP2O43150 1006 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 KLRC1P26715 233 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 CDK7P50613 346 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 IGBP1P78318 339 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 ASIC1P78348 528 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 DHX8Q14562 1220 aaKnown RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 PTGISQ16647 500 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 ARSHQ5FYA8 562 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 COL13A1Q5TAT6 717 aaPredicted RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 UBE2Q1Q7Z7E8 422 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 RSPH3Q86UC2 560 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 CCDC65Q8IXS2 484 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 NME8Q8N427 588 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 LINC01465Q8N7H1 131 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 TRAPPC12Q8WVT3 735 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 PSPC1Q8WXF1 523 aaKnown RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 DNAJC19Q96DA6 116 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 GSDMAQ96QA5 445 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 SENP6Q9GZR1 1112 aaPredicted RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 PARVGQ9HBI0 331 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 XPNPEP1Q9NQW7 623 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 OLFML3Q9NRN5 406 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 LARSQ9P2J5 1176 aaKnown RBP11.37□□□□□ -0.59
RFC1-210ENST00000505077 NOD1Q9Y239 953 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 RALGAPA2Q2PPJ7 1873 aa11.37□□□□□ -0.59
RFC1-210ENST00000505077 PDCD11Q14690 1871 aaKnown RBP11.36□□□□□ -0.59
RFC1-210ENST00000505077 H0YCG3 227 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 FAM13AO94988 1023 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 CYP2C9P11712 490 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 AFMP43652 599 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
RFC1-210ENST00000505077 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 RBL2Q08999 1139 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 DPYDQ12882 1025 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 MAPK7Q13164 816 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 PTK7Q13308 1070 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 ALCAMQ13740 583 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 GIT2Q14161 759 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 KCNB1Q14721 858 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 NT5DC1Q5TFE4 455 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
RFC1-210ENST00000505077 EFCAB12Q6NXP0 572 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 SLC39A5Q6ZMH5 540 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 RBM43Q6ZSC3 357 aaKnown RBP11.36□□□□□ -0.59
RFC1-210ENST00000505077 UNC13DQ70J99 1090 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 FAM126BQ8IXS8 530 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 METTL13Q8N6R0 699 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 TRIML1Q8N9V2 468 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 SPATA20Q8TB22 786 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 CAGE1Q8TC20 777 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 KCNN1Q92952 543 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 PAWRQ96IZ0 340 aaKnown RBP11.36□□□□□ -0.59
RFC1-210ENST00000505077 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
RFC1-210ENST00000505077 TET1Q8NFU7 2136 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 A0A087WWV3 80 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 DCDC2CA8MYV0 355 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 TREHO43280 583 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 TRAK2O60296 914 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 HIP1RO75146 1068 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 LETM1O95202 739 aaPredicted RBP11.35□□□□□ -0.59
RFC1-210ENST00000505077 RPN1P04843 607 aaKnown RBP11.35□□□□□ -0.59
RFC1-210ENST00000505077 MAPTP10636 758 aaKnown RBP11.35□□□□□ -0.59
RFC1-210ENST00000505077 PLS3P13797 630 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 ARL2P36404 184 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 NAMPTP43490 491 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 SMTNP53814 917 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 PNOCQ13519 176 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 CUL4BQ13620 913 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 TFDP1Q14186 410 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
RFC1-210ENST00000505077 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
RFC1-210ENST00000505077 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 TNS4Q8IZW8 715 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 DAW1Q8N136 415 aa11.35□□□□□ -0.59
RFC1-210ENST00000505077 DIS3LQ8TF46 1054 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms