RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 LYPLA2O95372 231 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 RSPH10BP0C881 870 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 PDIA5Q14554 519 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 MTERF2Q49AM1 385 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 PLEKHG4Q58EX7 1191 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 ARL6IP4Q66PJ3 421 aaKnown RBP18.84■□□□□ 0.61
SYNE4-207ENST00000505054 RPAINQ86UA6 219 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 MYOCDQ8IZQ8 938 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 DBF4BQ8NFT6 615 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 DNAJB3Q8WWF6 145 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 SAMD11Q96NU1 681 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 C17orf80Q9BSJ5 609 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 POLR3CQ9BUI4 534 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-207ENST00000505054 FAM49AQ9H0Q0 323 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-207ENST00000505054 C11orf16Q9NQ32 467 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 LRWD1Q9UFC0 647 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
SYNE4-207ENST00000505054 MYH9P35579 1960 aaKnown RBP18.84■□□□□ 0.61
SYNE4-207ENST00000505054 SMIM35A0A1B0GVV1 85 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 VWA3AA6NCI4 1184 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 CAND2O75155 1236 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 BRD1O95696 1058 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 CTSHP09668 335 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 YWHABP31946 246 aaKnown RBP18.83■□□□□ 0.6
SYNE4-207ENST00000505054 NPEPPSP55786 919 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 CATSPER3Q86XQ3 398 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 LINC01465Q8N7H1 131 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
SYNE4-207ENST00000505054 ERMNQ8TAM6 284 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 TUFT1Q9NNX1 390 aa18.83■□□□□ 0.6
SYNE4-207ENST00000505054 PI4K2BG5E9Z4 385 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 KCNA5P22460 613 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 RPA1P27694 616 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 CEBPZQ03701 1054 aaKnown RBP18.82■□□□□ 0.6
SYNE4-207ENST00000505054 GRIN1Q05586 938 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 MGAT3Q09327 533 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 ECM1Q16610 540 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 TIGD5Q53EQ6 642 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 FAM26DQ5JW98 314 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 KIAA0319LQ8IZA0 1049 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 MRPL38Q96DV4 380 aaKnown RBP18.82■□□□□ 0.6
SYNE4-207ENST00000505054 MMTAG2Q9BU76 263 aaKnown RBP18.82■□□□□ 0.6
SYNE4-207ENST00000505054 RAB34Q9BZG1 259 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 CD320Q9NPF0 282 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 CYP26B1Q9NR63 512 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 KAT6AQ92794 2004 aa18.82■□□□□ 0.6
SYNE4-207ENST00000505054 A0A087WWV3 80 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 FAM86C2PA6NEL3 165 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 MAGEB2O15479 319 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 CDC25AP30304 524 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
SYNE4-207ENST00000505054 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
SYNE4-207ENST00000505054 CLCN3P51790 818 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 TBC1D8BQ0IIM8 1120 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 PTPROQ16827 1216 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 HAUS3Q68CZ6 603 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 POTEGQ6S5H5 508 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 RSPH3Q86UC2 560 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 LRRC71Q8N4P6 559 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 SNX29Q8TEQ0 813 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 SEPT8Q92599 483 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 CEP170P1Q96L14 293 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 OSBPL7Q9BZF2 842 aa18.81■□□□□ 0.6
SYNE4-207ENST00000505054 IGKV6-21A0A0C4DH24 114 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 CHRNA1P02708 482 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 DDIT3P35638 169 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 MRPS6P82932 125 aaKnown RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 PIGOQ8TEQ8 1089 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 YME1L1Q96TA2 773 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 ANKEF1Q9NU02 776 aa18.8■□□□□ 0.6
SYNE4-207ENST00000505054 FBXO2Q9UK22 296 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 MORC2Q9Y6X9 1032 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-207ENST00000505054 MYH15Q9Y2K3 1946 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 MAFO75444 373 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 RPLP2P05387 115 aaKnown RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 IL9P15248 144 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 TMEM62Q0P6H9 643 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 DRP2Q13474 957 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 SLC39A14Q15043 492 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 PUS10Q3MIT2 529 aaKnown RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 EPC2Q52LR7 807 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 XKR9Q5GH70 373 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 KRT79Q5XKE5 535 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 PTCRAQ6ISU1 281 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 OTUD6AQ7L8S5 288 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 GJD3Q8N144 294 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 ZNF396Q96N95 335 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 TFIP11Q9UBB9 837 aaKnown RBP18.79■□□□□ 0.6
SYNE4-207ENST00000505054 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 CDY2AQ9Y6F7 541 aa18.79■□□□□ 0.6
SYNE4-207ENST00000505054 H3BNC9 293 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 MUTP22033 750 aa18.78■□□□□ 0.6
SYNE4-207ENST00000505054 RARRES1P49788 294 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms