RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 HHATQ5VTY9 493 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 SRRM1Q8IYB3 904 aaKnown RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF408Q9H9D4 720 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
CCDC149-204ENST00000504487 TRIM33Q9UPN9 1127 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
CCDC149-204ENST00000504487 KLHL33A6NCF5 533 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 RTN2O75298 545 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 SP4Q02446 784 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 SEMA3FQ13275 785 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 IL17AQ16552 155 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 KIAA1755Q5JYT7 1200 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 FYB2Q5VWT5 728 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF572Q7Z3I7 529 aaPredicted RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 MFN1Q8IWA4 741 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 FBXO25Q8TCJ0 367 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ERP44Q9BS26 406 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TUBGCP6Q96RT7 1819 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 MAPK13O15264 365 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ACTN1P12814 892 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 PLCG2P16885 1265 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 NCALDP61601 193 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 PTK2Q05397 1052 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 KCNH2Q12809 1159 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 MKRN4PQ13434 485 aaPredicted RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TLDC1Q6P9B6 456 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 REXO1Q8N1G1 1221 aaKnown RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 FAM84BQ96KN1 310 aaPredicted RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 SIK3Q9Y2K2 1263 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 C2CD2Q9Y426 696 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 USP17L3A6NCW0 530 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 USP17L4A6NCW7 530 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 C5orf60A6NFR6 353 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 KLRC4O43908 158 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 SNX3O60493 162 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 OPHN1O60890 802 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 BAG2O95816 211 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 RPS6KA3P51812 740 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TROAPQ12815 778 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 STRN3Q13033 797 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 DYNC1I2Q13409 638 aaKnown RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 GRAPQ13588 217 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 BLMHQ13867 455 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 USH1GQ495M9 461 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 NAALADL2Q58DX5 795 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 USP17L1Q7RTZ2 530 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TXNRD3Q86VQ6 643 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 CPXCR1Q8N123 301 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 GRAPLQ8TC17 118 aaPredicted RBP9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ACTRT1Q8TDG2 376 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 FBXO41Q8TF61 875 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 C7orf25Q9BPX7 421 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 HDAC9Q9UKV0 1011 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
CCDC149-204ENST00000504487 PASKQ96RG2 1323 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 NTSR2O95665 410 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 HNRNPH3P31942 346 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 SERPINB4P48594 390 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 ROR2Q01974 943 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 MESDQ14696 234 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 CAPN12Q6ZSI9 719 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 GSTA5Q7RTV2 222 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 APBB1IPQ7Z5R6 666 aaPredicted RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 PIGOQ8TEQ8 1089 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 MOV10L1Q9BXT6 1211 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 SEMA4AQ9H3S1 761 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 TMOD4Q9NZQ9 345 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 NRXN3Q9Y4C0 1643 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 hCG_2014768A0A024R1R8 64 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 DPPA5A6NC42 116 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 RPL13P26373 211 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 TARSP26639 723 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 ZNF268Q14587 947 aaPredicted RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 PLS1Q14651 629 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 PHLDB3Q6NSJ2 640 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 DTX3LQ8TDB6 740 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 RGL1Q9NZL6 768 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 STK17AQ9UEE5 414 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 CNTNAP5Q8WYK1 1306 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 PVALEFA0A1B0GWK0 134 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 POTEMA6NI47 508 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 MYMKA6NI61 221 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 NVLO15381 856 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 TBCAO75347 108 aaKnown RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 ATP5HO75947 161 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 VEGFAP15692 232 aaPredicted RBP9.28□□□□□ -0.92
CCDC149-204ENST00000504487 RFC5P40937 340 aa9.28□□□□□ -0.92
CCDC149-204ENST00000504487 ERFP50548 548 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms