RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 MAP7D2Q96T17 732 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 UHRF1Q96T88 793 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 C11orf84Q9BUA3 381 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 DHX33Q9H6R0 707 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 SEPT9Q9UHD8 586 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 PLAGL2Q9UPG8 496 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 LIMCH1Q9UPQ0 1083 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 AKT3Q9Y243 479 aa15.72■□□□□ 0.11
PDLIM7-211ENST00000504318 TNFRSF10AO00220 468 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 EIF5BO60841 1220 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 FGFR4P22455 802 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 TMOD1P28289 359 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 LTBRP36941 435 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 QARSP47897 775 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 RBM25P49756 843 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 NPEPPSP55786 919 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 EPHA7Q15375 998 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 PTPROQ16827 1216 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 CTC1Q2NKJ3 1217 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 LEXMQ3ZCV2 418 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 TIGD5Q53EQ6 642 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 SPPL3Q8TCT6 385 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 NAP1L4Q99733 375 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 HSD17B14Q9BPX1 270 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 NSUN3Q9H649 340 aaKnown RBP15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 CWH43Q9H720 699 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 CYP26B1Q9NR63 512 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 RGL1Q9NZL6 768 aa15.71■□□□□ 0.11
PDLIM7-211ENST00000504318 ZBTB39O15060 712 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 CSDE1O75534 798 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 FGFR1P11362 822 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 AAK1Q2M2I8 961 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 NAALADL2Q58DX5 795 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 CASD1Q96PB1 797 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 LXNQ9BS40 222 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 TMEM60Q9H2L4 133 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 IFT122Q9HBG6 1241 aa15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
PDLIM7-211ENST00000504318 A0A087WZ62 844 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 DENND3A2RUS2 1198 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 SLITRK3O94933 977 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 LYPLA2O95372 231 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 IRS1P35568 1242 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 FOSBP53539 338 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 HYAL1Q12794 435 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 CLLU1OSQ5K130 101 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 KSR1Q8IVT5 923 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 SLFN12Q8IYM2 578 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 DYDC2Q96IM9 177 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 XPNPEP1Q9NQW7 623 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 PCDHB7Q9Y5E2 793 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 C5orf42Q9H799 3197 aa15.69■□□□□ 0.1
PDLIM7-211ENST00000504318 A0A0U1RQF3 1178 aa15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 GTF2F1P35269 517 aaKnown RBP eCLIP15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 CTTNQ14247 550 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 ADGRD2Q7Z7M1 963 aa15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 ZNF410Q86VK4 478 aa15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 PABPC5Q96DU9 382 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 CD320Q9NPF0 282 aa15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 PPME1Q9Y570 386 aa15.68■□□□□ 0.1
PDLIM7-211ENST00000504318 TBKBP1A7MCY6 615 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 KCNA5P22460 613 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 YWHABP31946 246 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 DLX2Q07687 328 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 MINDY3Q9H8M7 445 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 BRMS1Q9HCU9 246 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 SUCLA2Q9P2R7 463 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 LRFN2Q9ULH4 789 aa15.67■□□□□ 0.1
PDLIM7-211ENST00000504318 FSCN2O14926 492 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 NEMFO60524 1076 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 TBX10O75333 385 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 SPATA31C1P0DKV0 1188 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 CDC42EP1Q00587 391 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 CYP4A11Q02928 519 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 RHPN2Q8IUC4 686 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 COLGALT1Q8NBJ5 622 aa15.66■□□□□ 0.1
PDLIM7-211ENST00000504318 FBXO18Q8NFZ0 1043 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms