RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ADD1P35611 737 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TUFMP49411 452 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 KRT83P78385 493 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ELF3P78545 371 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 KCTD2Q14681 263 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZC2HC1CQ53FD0 456 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ANO1Q5XXA6 986 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 NAA16Q6N069 864 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC174Q6PII3 467 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CAPN12Q6ZSI9 719 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PIK3AP1Q6ZUJ8 805 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 HID1Q8IV36 788 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 NELFCDQ8IXH7 590 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CCDC170Q8IYT3 715 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RDH13Q8NBN7 331 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 EHBP1Q8NDI1 1231 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TRIM58Q8NG06 486 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RIN2Q8WYP3 895 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 HERVK_113Q902F9 699 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CTAGE1Q96RT6 745 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 NOC4LQ9BVI4 516 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SELENOOQ9BVL4 669 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 HSD3B7Q9H2F3 369 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM204AQ9H8W3 233 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TRPM5Q9NZQ8 1165 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TMOD2Q9NZR1 351 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SRP68Q9UHB9 627 aaKnown RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 GTF3C4Q9UKN8 822 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZMYND8Q9ULU4 1186 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TMCO1Q9UM00 188 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CARNS1A5YM72 827 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 MAGEA13PA6NCF6 341 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TMEM232C9JQI7 657 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 WNT7AO00755 349 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 MCF2LO15068 1137 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PPIP5K2O43314 1243 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TAF5LO75529 589 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 PRCPP42785 496 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CENPCQ03188 943 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 DEPDC1Q5TB30 811 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SNX30Q5VWJ9 437 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 C8orf74Q6P047 294 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 CRELD2Q6UXH1 353 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 C11orf74Q86VG3 221 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 FAM114A1Q8IWE2 563 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 RASEFQ8IZ41 740 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 NKAIN3Q8N8D7 197 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 IRGQQ8WZA9 623 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 TP53INP1Q96A56 240 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 SPACA7Q96KW9 195 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 NAPGQ99747 312 aaPredicted RBP3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 MTMR12Q9C0I1 747 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 ZNF287Q9HBT7 754 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 LRRC42Q9Y546 428 aa3.97□□□□□ -1.77
PCDH11X-208ENST00000504220 DDX60Q8IY21 1712 aaKnown RBP3.96□□□□□ -1.77
PCDH11X-208ENST00000504220 TP53BP1Q12888 1972 aaPredicted RBP3.96□□□□□ -1.77
PCDH11X-208ENST00000504220 DYTNA2CJ06 578 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CHURC1-FNTBB4DL54 471 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 E7EVH7 732 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 NDUFA2O43678 99 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ANP32DO95626 131 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 HSPA1AP0DMV8 641 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 HSPA1BP0DMV9 641 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ICAM2P13598 275 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PORP16435 677 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RPS6KB1P23443 525 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CDC25BP30305 580 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PRKCIP41743 596 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TXKP42681 527 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 MAGEA1P43355 309 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CRKLP46109 303 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 NEK2P51955 445 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CUL3Q13618 768 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 R3HDM1Q15032 1099 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 PPP1R7Q15435 360 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TXNRD1Q16881 649 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ADCK5Q3MIX3 580 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 LACTB2Q53H82 288 aaPredicted RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 C6orf163Q5TEZ5 329 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 NAA35Q5VZE5 725 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 TMEM214Q6NUQ4 689 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 DTHD1Q6ZMT9 781 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 STOX1Q6ZVD7 989 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 FASTKD5Q7L8L6 764 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 LRRTM3Q86VH5 581 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CSGALNACT2Q8N6G5 542 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKS4BQ8N8V4 417 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ANKRD42Q8N9B4 389 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 GOLM1Q8NBJ4 401 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RSAD2Q8WXG1 361 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 AKT1S1Q96B36 256 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 INTS12Q96CB8 462 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 CDHR1Q96JP9 859 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 DNAJC18Q9H819 358 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ARMT1Q9H993 441 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ZFATQ9P243 1243 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 ZNF180Q9UJW8 692 aa3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 AFDNP55196 1824 aaKnown RBP3.96□□□□□ -1.78
PCDH11X-208ENST00000504220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms