RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 KRT76Q01546 638 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 TMEM132BQ14DG7 1078 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 LONRF2Q1L5Z9 754 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 UTP14CQ5TAP6 766 aaKnown RBP24.58■■□□□ 1.52
PCDH1-204ENST00000503492 PRDM10Q9NQV6 1147 aa24.58■■□□□ 1.52
PCDH1-204ENST00000503492 IQCEQ6IPM2 695 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 XRRA1Q6P2D8 792 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 TRMT1LQ7Z2T5 733 aaKnown RBP24.57■■□□□ 1.52
PCDH1-204ENST00000503492 HNRNPLLQ8WVV9 542 aaKnown RBP24.57■■□□□ 1.52
PCDH1-204ENST00000503492 PACSIN1Q9BY11 444 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 PRLRP16471 622 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 SFNP31947 248 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 VSNL1P62760 191 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 NAB2Q15742 525 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 CATSPERGQ6ZRH7 1159 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 SMAP1Q8IYB5 467 aaPredicted RBP24.57■■□□□ 1.52
PCDH1-204ENST00000503492 RPGRIP1Q96KN7 1286 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 FUT8Q9BYC5 575 aa24.57■■□□□ 1.52
PCDH1-204ENST00000503492 BZW2Q9Y6E2 419 aaKnown RBP24.57■■□□□ 1.52
PCDH1-204ENST00000503492 TISP43B9A030 160 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 EXOC3O60645 756 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 TRIM49P0CI25 452 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 TRIM49CP0CI26 452 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 KLRC1P26715 233 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 PRKCIP41743 596 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 PPP2R5AQ15172 486 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CBWD6Q4V339 395 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CBWD3Q5JTY5 395 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CBWD5Q5RIA9 395 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CREG2Q8IUH2 290 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CAGE1Q8TC20 777 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 CCDC43Q96MW1 224 aaKnown RBP24.56■■□□□ 1.52
PCDH1-204ENST00000503492 GPRC5CQ9NQ84 441 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 ALCAMQ13740 583 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 PLA2G4FQ68DD2 849 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 COG1Q8WTW3 980 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 GPRASP2Q96D09 838 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 TMEM206Q9H813 350 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 TCEAL9Q9UHQ7 104 aa24.56■■□□□ 1.52
PCDH1-204ENST00000503492 NCK2O43639 380 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 NPEPPSP55786 919 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 MYBPC2Q14324 1141 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 KIAA0753Q2KHM9 967 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 BEND6Q5SZJ8 279 aaPredicted RBP24.55■■□□□ 1.52
PCDH1-204ENST00000503492 NFRKBQ6P4R8 1299 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 RDH13Q8NBN7 331 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 INPP4AQ96PE3 977 aaPredicted RBP24.55■■□□□ 1.52
PCDH1-204ENST00000503492 OSBPL9Q96SU4 736 aa24.55■■□□□ 1.52
PCDH1-204ENST00000503492 NAP1L1P55209 391 aaKnown RBP24.54■■□□□ 1.52
PCDH1-204ENST00000503492 BFSP1Q12934 665 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ACCSQ96QU6 501 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 TLR10Q9BXR5 811 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ST7Q9NRC1 585 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 HYOU1Q9Y4L1 999 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ATP2A1O14983 1001 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 RGS20O76081 388 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 PRKG1Q13976 671 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 XKR9Q5GH70 373 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 NOL9Q5SY16 702 aaKnown RBP24.54■■□□□ 1.52
PCDH1-204ENST00000503492 NLRX1Q86UT6 975 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 MOV10L1Q9BXT6 1211 aaKnown RBP24.54■■□□□ 1.52
PCDH1-204ENST00000503492 PCIF1Q9H4Z3 704 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ABCB6Q9NP58 842 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ANKEF1Q9NU02 776 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 RNF216Q9NWF9 866 aaPredicted RBP24.54■■□□□ 1.52
PCDH1-204ENST00000503492 TMOD4Q9NZQ9 345 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 AFG3L2Q9Y4W6 797 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 PPP2R3BQ9Y5P8 575 aa24.54■■□□□ 1.52
PCDH1-204ENST00000503492 ZNF746Q6NUN9 644 aaPredicted RBP24.53■■□□□ 1.52
PCDH1-204ENST00000503492 HAUS6Q7Z4H7 955 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 NSUN6Q8TEA1 469 aaKnown RBP24.53■■□□□ 1.52
PCDH1-204ENST00000503492 TIPINQ9BVW5 301 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 KIAA1217Q5T5P2 1943 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 TCP1P17987 556 aaKnown RBP24.53■■□□□ 1.52
PCDH1-204ENST00000503492 GTF2BQ00403 316 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 WDR93Q6P2C0 686 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 GPC2Q8N158 579 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 RDM1Q8NG50 284 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 SENP7Q9BQF6 1050 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 TEX13BQ9BXU2 312 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 ST6GALNAC4Q9H4F1 302 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 CYP39A1Q9NYL5 469 aa24.53■■□□□ 1.52
PCDH1-204ENST00000503492 MAFGO15525 162 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 KCNA2P16389 499 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 PEX3P56589 373 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 ANO5Q75V66 913 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 PSMB7Q99436 277 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 CBWD1Q9BRT8 395 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 A1CFQ9NQ94 594 aaKnown RBP24.52■■□□□ 1.52
PCDH1-204ENST00000503492 PCDHA10Q9Y5I2 948 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 POLR2AP24928 1970 aaKnown RBP24.52■■□□□ 1.52
PCDH1-204ENST00000503492 SPDYE16A6NNV3 312 aaPredicted RBP24.52■■□□□ 1.52
PCDH1-204ENST00000503492 SLC16A4O15374 487 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 ERLIN1O75477 346 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 PALMO75781 387 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 TUBBP07437 444 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 CXCR5P32302 372 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 C10orf76Q5T2E6 689 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 C12orf56Q8IXR9 622 aa24.52■■□□□ 1.52
PCDH1-204ENST00000503492 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms