RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 DRP2Q13474 957 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 IRF5Q13568 498 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 KCNJ12Q14500 433 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 NR1I3Q14994 352 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 EMC2Q15006 297 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 KNOP1Q1ED39 458 aaKnown RBP7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 TCP11X2Q5H9J9 407 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 MIIPQ5JXC2 388 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ODR4Q5SWX8 454 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 FAM160B1Q5W0V3 765 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 IQSEC1Q6DN90 963 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 OTUD6AQ7L8S5 288 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 FAM178BQ8IXR5 827 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 CSGALNACT2Q8N6G5 542 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 SPC24Q8NBT2 197 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ASAP3Q8TDY4 903 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ATP8B4Q8TF62 1192 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 TRAPPC12Q8WVT3 735 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 KIFC3Q9BVG8 833 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 TIPINQ9BVW5 301 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 SRRTQ9BXP5 876 aaKnown RBP7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 RNPEPQ9H4A4 650 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ST6GALNAC4Q9H4F1 302 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 THAP9Q9H5L6 903 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 ATP6V0A4Q9HBG4 840 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 SLC5A4Q9NY91 659 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 TAB2Q9NYJ8 693 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 TRAF3IP3Q9Y228 551 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 SCN10AQ9Y5Y9 1956 aa7.62□□□□□ -1.19
TOPBP1-203ENST00000503464 UBE4BO95155 1302 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 IGKV6-21A0A0C4DH24 114 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 MYADML2A6NDP7 307 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TISP43B9A030 160 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 K7ENM7 598 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 SLC16A4O15374 487 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 MAFO75444 373 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 SERPINC1P01008 464 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 EDN1P05305 212 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 MAPTP10636 758 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 GLRA2P23416 452 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 ARL2P36404 184 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 MAP2K2P36507 400 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 NPTX2P47972 431 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 COPB1P53618 953 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 PEX3P56589 373 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 UBASH3AP57075 661 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 RTP1P59025 263 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TPM4P67936 248 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 GTF2BQ00403 316 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 SP3Q02447 781 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TNFAIP2Q03169 654 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 ARID5BQ14865 1188 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 EDRF1Q3B7T1 1238 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 FAM102BQ5T8I3 360 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 VSTM4Q8IW00 320 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 LINC01465Q8N7H1 131 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TMEM161BQ8NDZ6 487 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 MCPH1Q8NEM0 835 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 OR6J1Q8NGC5 347 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 CD99L2Q8TCZ2 262 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 NOC3LQ8WTT2 800 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 SPIRE2Q8WWL2 714 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 KAT2BQ92831 832 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 GLG1Q92896 1179 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 TMEM143Q96AN5 459 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 FAM167AQ96KS9 214 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 CNOT6LQ96LI5 555 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 DRC1Q96MC2 740 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 CCDC43Q96MW1 224 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 NTPCRQ9BSD7 190 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 POLR3FQ9H1D9 316 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 KCNF1Q9H3M0 494 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 SMARCAD1Q9H4L7 1026 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 AZI2Q9H6S1 392 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 RTN4Q9NQC3 1192 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 ANK1P16157 1881 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 PCNTO95613 3336 aa7.61□□□□□ -1.19
TOPBP1-203ENST00000503464 A6NJR5 290 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 RBAK-RBAKDNI3L0D1 243 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 PDXKO00764 312 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 C22orf31O95567 290 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 EEF1GP26641 437 aaKnown RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 RFC5P40937 340 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 CASP4P49662 377 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 SLC26A2P50443 739 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 POLGP54098 1239 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 TBX2Q13207 712 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 CAPSQ13938 189 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 HIC1Q14526 733 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 NFIL3Q16649 462 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 TPD52L1Q16890 204 aaPredicted RBP7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 CEP135Q66GS9 1140 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 SLC39A4Q6P5W5 647 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 HAUS6Q7Z4H7 955 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 TLK2Q86UE8 772 aa7.6□□□□□ -1.19
TOPBP1-203ENST00000503464 ANP32BQ92688 251 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms