RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RBBP5Q15291 538 aaKnown RBP8.04□□□□□ -1.12
PDGFC-203ENST00000502773 DNAJC21Q5F1R6 531 aaKnown RBP8.04□□□□□ -1.12
PDGFC-203ENST00000502773 KLHDC7AQ5VTJ3 777 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 ALKBH5Q6P6C2 394 aaKnown RBP8.04□□□□□ -1.12
PDGFC-203ENST00000502773 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 RHOXF2Q9BQY4 288 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 KCTD10Q9H3F6 313 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 SPATS2LQ9NUQ6 558 aaKnown RBP8.04□□□□□ -1.12
PDGFC-203ENST00000502773 GCNT4Q9P109 453 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 MYH8P13535 1937 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 CHMP2AO43633 222 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 PPP1R11O60927 126 aaPredicted RBP8.04□□□□□ -1.12
PDGFC-203ENST00000502773 RTP1P59025 263 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 EVX2Q03828 476 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 RUFY4Q6ZNE9 571 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 CRYGNQ8WXF5 182 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 CAMKK2Q96RR4 588 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 LXNQ9BS40 222 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 PCDHA10Q9Y5I2 948 aa8.04□□□□□ -1.12
PDGFC-203ENST00000502773 TRIM66O15016 1216 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 GAS2O43903 313 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 UCHL3P15374 230 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 HOXA13P31271 388 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZNF131P52739 623 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZNF280AP59817 542 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 RASSF7Q02833 373 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 CYP4A11Q02928 519 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 COG2Q14746 738 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZNF720Q7Z2F6 126 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SPICE1Q8N0Z3 855 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 GMLQ99445 158 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 TAF1P21675 1872 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 DGAT1O75907 488 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 TNFRSF8P28908 595 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SOX5P35711 763 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 PTGER2P43116 358 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 C1orf186Q6ZWK4 172 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 EPM2AIP1Q7L775 607 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZNF572Q7Z3I7 529 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SCYL3Q8IZE3 742 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SPIRE2Q8WWL2 714 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 OSBPL9Q96SU4 736 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SLITRK6Q9H5Y7 841 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 FAM114A2Q9NRY5 505 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 VAV3Q9UKW4 847 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 DDX60LQ5H9U9 1706 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 KIF4AO95239 1232 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 WDR59Q6PJI9 974 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 MICALCLQ6ZW33 695 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SPATS2Q86XZ4 545 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 EGFL6Q8IUX8 553 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 TMC2Q8TDI7 906 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SENP7Q9BQF6 1050 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 DNAJC18Q9H819 358 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ACAD9Q9H845 621 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 PGRMC1O00264 195 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ZRANB2O95218 330 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 DPEP1P16444 411 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 HERVK_113P62684 666 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 CTTNQ14247 550 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 ODF2Q5BJF6 829 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SEL1L2Q5TEA6 688 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 LIN9Q5TKA1 542 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SMCR8Q8TEV9 937 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 BICD1Q96G01 975 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 FNBP1Q96RU3 617 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 RMDN3Q96TC7 470 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 SEPT11Q9NVA2 429 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 UTP11Q9Y3A2 253 aaKnown RBP8.03□□□□□ -1.12
PDGFC-203ENST00000502773 UBIAD1Q9Y5Z9 338 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 CSADQ9Y600 493 aa8.03□□□□□ -1.12
PDGFC-203ENST00000502773 FAM86B1E9PN63 330 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 SLITRK3O94933 977 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 FAM86B2P0C5J1 330 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 TMEM253P0C7T8 217 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 MYBL1P10243 752 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 CHRM1P11229 460 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-203ENST00000502773 FMO5P49326 533 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 TRIM72Q6ZMU5 477 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 ZNF677Q86XU0 584 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 ZFPM1Q8IX07 1006 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 NT5C1BQ96P26 610 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 SLC38A10Q9HBR0 1119 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 ZNF277Q9NRM2 450 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-203ENST00000502773 STIM2Q9P246 746 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 MTRF1LQ9UGC7 380 aaKnown RBP8.02□□□□□ -1.13
PDGFC-203ENST00000502773 NFASCO94856 1347 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 FOCADQ5VW36 1801 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 GOLGA6BA6NDN3 693 aa8.02□□□□□ -1.13
PDGFC-203ENST00000502773 MYCLP12524 364 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms