RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 TSHZ1Q6ZSZ6 1077 aa16.08■□□□□ 0.16
CLDND1-206ENST00000502299 FAM43BQ6ZT52 329 aaPredicted RBP16.08■□□□□ 0.16
CLDND1-206ENST00000502299 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
CLDND1-206ENST00000502299 CEP170P1Q96L14 293 aa16.08■□□□□ 0.16
CLDND1-206ENST00000502299 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
CLDND1-206ENST00000502299 IFIH1Q9BYX4 1025 aaKnown RBP16.08■□□□□ 0.16
CLDND1-206ENST00000502299 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
CLDND1-206ENST00000502299 WDR81Q562E7 1941 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 IGKV6-21A0A0C4DH24 114 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 TMEM150BA6NC51 233 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
CLDND1-206ENST00000502299 GHRP10912 638 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 CRYBB1P53674 252 aaPredicted RBP16.07■□□□□ 0.16
CLDND1-206ENST00000502299 XKR9Q5GH70 373 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 ODR4Q5SWX8 454 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 FAM117BQ6P1L5 589 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 DTHD1Q6ZMT9 781 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 CATSPER3Q86XQ3 398 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 SLC7A3Q8WY07 619 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
CLDND1-206ENST00000502299 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 LRWD1Q9UFC0 647 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
CLDND1-206ENST00000502299 COL4A4P53420 1690 aaPredicted RBP16.07■□□□□ 0.16
CLDND1-206ENST00000502299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 STX6O43752 255 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 VTNP04004 478 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 SPATA31C1P0DKV0 1188 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 MUTP22033 750 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 RPA1P27694 616 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 RFC5P40937 340 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 CLCN3P51790 818 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 NPEPPSP55786 919 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 ATP2C1P98194 919 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 ARL6IP4Q66PJ3 421 aaKnown RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 HAUS3Q68CZ6 603 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 FERMT3Q86UX7 667 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 NACC1Q96RE7 527 aa16.06■□□□□ 0.16
CLDND1-206ENST00000502299 TGS1Q96RS0 853 aaKnown RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 ZSCAN16Q9H4T2 348 aaPredicted RBP16.06■□□□□ 0.16
CLDND1-206ENST00000502299 FAM86C2PA6NEL3 165 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 ZBTB39O15060 712 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 GPR182O15218 404 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 GPR32O75388 356 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 BMP15O95972 392 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 AMHP03971 560 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 POLGP54098 1239 aaPredicted RBP16.05■□□□□ 0.16
CLDND1-206ENST00000502299 NLRP11P59045 1033 aaKnown RBP16.05■□□□□ 0.16
CLDND1-206ENST00000502299 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
CLDND1-206ENST00000502299 C17orf80Q9BSJ5 609 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 FTHL17Q9BXU8 183 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
CLDND1-206ENST00000502299 AGO3Q9H9G7 860 aaKnown RBP16.05■□□□□ 0.16
CLDND1-206ENST00000502299 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
CLDND1-206ENST00000502299 GAS2O43903 313 aaKnown RBP16.04■□□□□ 0.16
CLDND1-206ENST00000502299 GPR37L1O60883 481 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 MED24O75448 989 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 CD52P31358 61 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 GPC3P51654 580 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 PAK2Q13177 524 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 TCP11Q8WWU5 503 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
CLDND1-206ENST00000502299 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-206ENST00000502299 SUCLA2Q9P2R7 463 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-206ENST00000502299 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
CLDND1-206ENST00000502299 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
CLDND1-206ENST00000502299 EVPLQ92817 2033 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 PI4K2BG5E9Z4 385 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 ENPP3O14638 875 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 ASAP2O43150 1006 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 DGAT1O75907 488 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 CCT6AP40227 531 aaKnown RBP16.03■□□□□ 0.16
CLDND1-206ENST00000502299 RARRES1P49788 294 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
CLDND1-206ENST00000502299 RESTQ13127 1097 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 DRP2Q13474 957 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 SF3A1Q15459 793 aaKnown RBP16.03■□□□□ 0.16
CLDND1-206ENST00000502299 IL17AQ16552 155 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.03■□□□□ 0.16
CLDND1-206ENST00000502299 PIGOQ8TEQ8 1089 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 PPP1R16BQ96T49 567 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 OSMRQ99650 979 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 MTRQ99707 1265 aa16.03■□□□□ 0.16
CLDND1-206ENST00000502299 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
CLDND1-206ENST00000502299 HCN4Q9Y3Q4 1203 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms