RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 PABPC4Q13310 644 aaKnown RBP eCLIP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 CRHR2Q13324 411 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 SEPT2Q15019 361 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 RAB3GAP1Q15042 981 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 BLOC1S2Q6QNY1 142 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 RUFY4Q6ZNE9 571 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 DYMQ7RTS9 669 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 C2CD4AQ8NCU7 369 aaPredicted RBP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 GMCL1P1Q8NEA9 526 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 TM9SF2Q99805 663 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 TM6SF1Q9BZW5 370 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 PIF1Q9H611 641 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 ZSWIM4Q9H7M6 989 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 VCPKMTQ9H867 229 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 ACTR10Q9NZ32 417 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 KLHL3Q9UH77 587 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 R3HCC1Q9Y3T6 440 aaKnown RBP8.62□□□□□ -1.03
GARNL3-222ENST00000498801 ACTL7BQ9Y614 415 aa8.62□□□□□ -1.03
GARNL3-222ENST00000498801 WDR19Q8NEZ3 1342 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 A0A0G2JMZ2 1700 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 SLC22A31A6NKX4 558 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 PDHXO00330 501 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 PRC1O43663 620 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 NMT2O60551 498 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 TTLL1O95922 423 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
GARNL3-222ENST00000498801 HMGCS2P54868 508 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 ANTXR2P58335 489 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 CCDC178Q5BJE1 867 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 TREML2Q5T2D2 321 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 Q6ZS46 218 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 CHST3Q7LGC8 479 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 IQCA1Q86XH1 822 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 CLEC10AQ8IUN9 316 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 C19orf47Q8N9M1 422 aaKnown RBP8.61□□□□□ -1.03
GARNL3-222ENST00000498801 ACER1Q8TDN7 264 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 CEP95Q96GE4 821 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 UBAC1Q9BSL1 405 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 MTA3Q9BTC8 594 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 FBRSQ9HAH7 460 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 IL17RBQ9NRM6 502 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 FAM105AQ9NUU6 356 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 MORF4L1Q9UBU8 362 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 TJP2Q9UDY2 1190 aa8.61□□□□□ -1.03
GARNL3-222ENST00000498801 TNKSO95271 1327 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ERICH2A1L162 156 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 IFIT3O14879 490 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 WDR46O15213 610 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 EEF2P13639 858 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 CPA1P15085 419 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 RPS6KB1P23443 525 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 GUCY2CP25092 1073 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ASPAP45381 313 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 PREPP48147 710 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 GCLCP48506 637 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 EXOSC10Q01780 885 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 FAM110CQ1W6H9 321 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 C17orf99Q6UX52 265 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 RUFY3Q7L099 469 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 NLRC3Q7RTR2 1065 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 UBE3DQ7Z6J8 389 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 TAB3Q8N5C8 712 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ENAHQ8N8S7 591 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ZNF507Q8TCN5 953 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ANKS1AQ92625 1134 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ISL2Q96A47 359 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 TCEANC2Q96MN5 208 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 TTC14Q96N46 770 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 NACC1Q96RE7 527 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 KIF2CQ99661 725 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 UPF3BQ9BZI7 483 aaKnown RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
GARNL3-222ENST00000498801 TNKS2Q9H2K2 1166 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 PIDD1Q9HB75 910 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 TMOD4Q9NZQ9 345 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 SIRPGQ9P1W8 387 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 STX8Q9UNK0 236 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 CYP46A1Q9Y6A2 500 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 PTPRFP10586 1907 aa8.6□□□□□ -1.03
GARNL3-222ENST00000498801 CHURC1-FNTBB4DL54 471 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 C9orf172C9J069 976 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 SH2B2O14492 632 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-222ENST00000498801 PLA2G6O60733 806 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 SNHG28P0DPA3 235 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 NME1P15531 152 aaKnown RBP8.59□□□□□ -1.03
GARNL3-222ENST00000498801 NRG1Q02297 640 aaPredicted RBP8.59□□□□□ -1.03
GARNL3-222ENST00000498801 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
GARNL3-222ENST00000498801 WTAPQ15007 396 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 SEC23AQ15436 765 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 PPP2R5EQ16537 467 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 CATSPERGQ6ZRH7 1159 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
GARNL3-222ENST00000498801 HID1Q8IV36 788 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms